Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_015457.1
Length=165919
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 102 9e-17
>seq7918
Length=32631
Score = 102 bits (112), Expect = 9e-17
Identities = 272/413 (66%), Gaps = 12/413 (3%)
Strand=Plus/Plus
Query 138006 TTCAGTTGAACGCCATAATCCATATGACGAATACGGTTTTCTTCTACGCCTTTGTTATTT 138065
||||| || || |||||||||| ||| || | || ||||| || ||||| || |||
Sbjct 18042 TTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTT 18101
Query 138066 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 138125
|| || || | || ||| ||||| |||||| | ||||| | ||||| ||
Sbjct 18102 TTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCT 18161
Query 138126 CCGCCACGAATTCCACCCTGTGAGCATGATTTAACAGCAGTCTGAAAATGTTTCCAAAAA 138185
|| || || | || || || ||||| ||||| || || || || |||||||| |||||
Sbjct 18162 CCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAA 18221
Query 138186 GGAATAACACCAGTATGACGTACTTCACCTGTACCAATCTTAGAACCTTCGGCACGAATC 138245
|||||| || |||||| | ||||| | ||| ||| ||| || |||
Sbjct 18222 GGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATC 18281
Query 138246 ATACCAACGTTAATACCAATTCCAGCGCGTTTGGAGATATATTCAACAATTGAA---GCA 138302
| || | ||||| ||||| || || |||| |||| |||| ||||| | | ||
Sbjct 18282 TTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCG 18341
Query 138303 GAAGCTTTGTTAATAGACTTCAGCGAATCACCTGC---TTCAATAACAACGCATGAACTA 138359
| || ||| || || | | || | |||| || || | || || || |||
Sbjct 18342 GTGGCATTG---ATGGAGTCTA---AACTATCTGCACACTCGATTAACACACAAGAGCTA 18395
Query 138360 AACTGCCGAGTTGGAGTACGACAGCCAGCCATAATAGGAGTTGGTAATGAAAT 138412
|| || || ||||| |||||| || |||||||| ||||| || | |||||
Sbjct 18396 AATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT 18448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 530615888356680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |