Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_016073.1 Length=157950 Score E Sequences producing significant alignments: (Bits) Value seq11528 82.4 8e-11 >seq11528 Length=3627 Score = 82.4 bits (90), Expect = 8e-11 Identities = 66/80 (83%), Gaps = 0/80 (0%) Strand=Plus/Plus Query 137449 TGGCCCCGTAGCTCAGTGGTTAGAGCAGTCGACTCATAATCGATTGGTCGCTGGTTCAAG 137508 ||||||| |||||||||||||||||||| ||||||||||||| |||||| | |||||| Sbjct 59 TGGCCCCTTAGCTCAGTGGTTAGAGCAGACGACTCATAATCGTTTGGTCCCCCGTTCAAA 118 Query 137509 TCCAGCCAGGGTCACCACTA 137528 || | ||| ||||| || Sbjct 119 TCGGGGAGGGGCCACCATTA 138 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 505124548197200