Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_017972.1
Length=280538
Score E
Sequences producing significant alignments: (Bits) Value
seq29671 91.5 3e-13
>seq29671
Length=17088
Score = 91.5 bits (100), Expect = 3e-13
Identities = 92/117 (79%), Gaps = 2/117 (2%)
Strand=Plus/Plus
Query 23041 GGTGTGGTATTGGAAAACTCCAGAGTAAGCGAG-CCTTTCCATTCTGGTTCCAGCGGCGT 23099
||||| ||||| |||||||| ||||||| || | |||| |||| | ||||||| || ||
Sbjct 9312 GGTGTAGTATTTGAAAACTCTAGAGTAA-CGTGACCTTCCCATCCAGGTTCCAATGGTGT 9370
Query 23100 GACGTTTACGATGATGCCGCAACGCGCATACGTCGATTTGCCGAGGCAGATAACTAA 23156
|| ||||| || || || || | ||||| ||||||||||| | |||||||||||
Sbjct 9371 AACATTTACTATAATTCCACATCTTGCATAAGTCGATTTGCCAACACAGATAACTAA 9427
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 897260626434160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |