Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_017974.1
Length=149273
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 82.4 7e-11
>seq7918
Length=32631
Score = 82.4 bits (90), Expect = 7e-11
Identities = 140/198 (71%), Gaps = 4/198 (2%)
Strand=Plus/Plus
Query 120264 CCTCACCACCACGAATGGCAGAATCCTGAC-CACGAATCATGCCGAAGTTCAGGCCGATC 120322
||||||| || ||||||| | ||| | | || ||| ||||| || | || ||
Sbjct 18244 CCTCACCGCCGCGAATGGG-GCTGCCTAAGGCGCGGATCTTGCCGGCATTAATCCCAATA 18302
Query 120323 CCGGCTCGTTGAGCCGCATATTT-ACCCTGCGCCGTGTTGGCGTTAAAGATCTGGTCGAT 120381
||||| ||||||| | ||||| || || || || || | | ||| ||| |
Sbjct 18303 CCGGCACGTTGAGAGACGTATTTCACAATG-GCACTGGCGGTGGCATTGATGGAGTCTAA 18361
Query 120382 ATTATCACCAGACTCAATCAGTACGCAAGAGCTAAACTGACGGGTCGGGGTACGAACACC 120441
| |||| || |||| || | || ||||||||||| |||||||| ||||||||||||||
Sbjct 18362 ACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACGGGTTGGGGTACGAACACC 18421
Query 120442 CGCCATGATCGGGGTCGG 120459
|||||| ||||| || ||
Sbjct 18422 CGCCATAATCGGAGTAGG 18439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 477368448490360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |