Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_018087.3 Length=166687 Score E Sequences producing significant alignments: (Bits) Value seq7918 96.9 4e-15 >seq7918 Length=32631 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/146 (75%), Gaps = 0/146 (0%) Strand=Plus/Plus Query 142063 ATACCAATACCAGCACGTTTAGAAACATATTTTACAATAGCTGATGTACTTTCAGTAATT 142122 || |||||||| ||||||| ||| || ||||| ||||| || | | || | || Sbjct 18294 ATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCGGTGGCATTGATG 18353 Query 142123 GAATCTAGGCTATCGCCGGTTTCAATTAAAACACATGAACTAAATTGACGAGTTGGGGTA 142182 || |||| ||||| | || ||||| ||||| || ||||||||||| ||||||||| Sbjct 18354 GAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACGGGTTGGGGTA 18413 Query 142183 CGAACACCGGCAAGAATAGGAGTAGG 142208 |||||||| || | ||| |||||||| Sbjct 18414 CGAACACCCGCCATAATCGGAGTAGG 18439 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533072576679240