Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_019406.1 Length=279967 Score E Sequences producing significant alignments: (Bits) Value seq29593 84.2 4e-11 >seq29593 Length=7136 Score = 84.2 bits (92), Expect = 4e-11 Identities = 64/76 (84%), Gaps = 0/76 (0%) Strand=Plus/Minus Query 132959 TGATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTC 133018 ||| ||| |||||||||||| |||||||||| ||||||||||| ||||||| ||||| Sbjct 3568 TGACGCGAGGTGGAGCAGTCTGGTAGCTCGTCAGGCTCATAACCTGAAGGTCGTTGGTTC 3509 Query 133019 AAATCCCTCCCCCGCA 133034 |||||| ||| |||| Sbjct 3508 AAATCCAGCCCTCGCA 3493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 895434104256840