Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq15784 86.0 9e-12 >seq15784 Length=8151 Score = 86.0 bits (94), Expect = 9e-12 Identities = 73/90 (81%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 50547 TGTGCGAATGTGGCGGAACTGGTAGACGCGCCGGCCTCAGGTGCCGGTGCCCTTCGGGGC 50606 |||||||| ||||||||| |||||||||||| || |||||||| ||| ||| || Sbjct 1200 TGTGCGAAGGTGGCGGAATTGGTAGACGCGCTAGCTTCAGGTGCTAGTGTCCTCTAGGAT 1141 Query 50607 GTGTGGGTTCGAGTCCCACCTTTCGTACCA 50636 ||| ||||||||||||| || |||| |||| Sbjct 1140 GTGAGGGTTCGAGTCCCTCCCTTCGCACCA 1111 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715510473945600