Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_019500.1
Length=168066
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 116 4e-21
>seq7918
Length=32631
Score = 116 bits (128), Expect = 4e-21
Identities = 270/407 (66%), Gaps = 0/407 (0%)
Strand=Plus/Minus
Query 94847 TTTCATTACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTT 94906
|||| | || ||||| |||||||| || | ||||| ||||||||||||||||| ||||
Sbjct 18447 TTTCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGCTCTT 18388
Query 94907 GTGTGGTTATTGAAGCAGGCGACTCACTGAAATCTATTAACAAAACTGCTAACTCAATAA 94966
||||| | || || | || | | || || || || || | | ||
Sbjct 18387 GTGTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAATGCCACCGCCAGTGCCATTG 18328
Query 94967 TTGAATACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAG 95026
| ||||| | ||| |||||||||||||||| || || | || | ||| || || ||
Sbjct 18327 TGAAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCCTTAG 18268
Query 95027 GTTCTCGTATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATT 95086
| | ||| || || || | | |||||||| |||||| || | |||||||
Sbjct 18267 GCAGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTACAAACATT 18208
Query 95087 TCCAGACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTT 95146
|||| || || || ||||| || || ||||| || | || || || || ||||| |
Sbjct 18207 TCCAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTACCCTCT 18148
Query 95147 ATTATCCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGGTG 95206
||||| | |||||| ||||| ||| ||| | || | |||||||| || |
Sbjct 18147 TCTATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAATCGGGGCG 18088
Query 95207 TCGATGAGAACCGTATTCGCCATATGGACTACGGAATCCAGATGAAC 95253
| || || || || | |||||| |||| || || | ||| |||||
Sbjct 18087 TTGAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAAC 18041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 537483739695920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |