Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_019500.1 Length=168066 Score E Sequences producing significant alignments: (Bits) Value seq7918 116 4e-21 >seq7918 Length=32631 Score = 116 bits (128), Expect = 4e-21 Identities = 270/407 (66%), Gaps = 0/407 (0%) Strand=Plus/Minus Query 94847 TTTCATTACCAACTCCTATTATGGCTGGAGCACGTACACCAACCCGTCAATTTAGTTCTT 94906 |||| | || ||||| |||||||| || | ||||| ||||||||||||||||| |||| Sbjct 18447 TTTCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGCTCTT 18388 Query 94907 GTGTGGTTATTGAAGCAGGCGACTCACTGAAATCTATTAACAAAACTGCTAACTCAATAA 94966 ||||| | || || | || | | || || || || || | | || Sbjct 18387 GTGTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAATGCCACCGCCAGTGCCATTG 18328 Query 94967 TTGAATACATTTCTAAACGTGCCGGTATTGGTATCAACGTTGGTATGATTCGTGCTGAAG 95026 | ||||| | ||| |||||||||||||||| || || | || | ||| || || || Sbjct 18327 TGAAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCCTTAG 18268 Query 95027 GTTCTCGTATTGGCATGGGCGAAGTCAAGCATACCGGTGTTATTCCATTCTGGAAACATT 95086 | | ||| || || || | | |||||||| |||||| || | ||||||| Sbjct 18267 GCAGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTACAAACATT 18208 Query 95087 TCCAGACTGCTGTTAAATCATGTTCACAAGGTGGAATCCGTGGCGGCGCTGCTACTGCTT 95146 |||| || || || ||||| || || ||||| || | || || || || ||||| | Sbjct 18207 TCCAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTACCCTCT 18148 Query 95147 ATTATCCTATTTGGCATTTGGAAGTTGAAAATCTGCTCGTTCTGAAAAACAACAAAGGTG 95206 ||||| | |||||| ||||| ||| ||| | || | |||||||| || | Sbjct 18147 TCTATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAATCGGGGCG 18088 Query 95207 TCGATGAGAACCGTATTCGCCATATGGACTACGGAATCCAGATGAAC 95253 | || || || || | |||||| |||| || || | ||| ||||| Sbjct 18087 TTGAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAAC 18041 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 537483739695920