Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_019909.1
Length=168809
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 138 1e-27
seq11528 86.0 7e-12
>seq7918
Length=32631
Score = 138 bits (152), Expect = 1e-27
Identities = 271/401 (68%), Gaps = 0/401 (0%)
Strand=Plus/Plus
Query 146569 TGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAGT 146628
|| || |||||||| || ||||| | || ||||| ||||| || |||||| || |
Sbjct 18048 TGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTTTTTAAC 18107
Query 146629 ACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAATACAAAGTAGCTGCACCGCCA 146688
|| | |||| ||||||||| ||||||| | |||||| | | ||||| || || ||
Sbjct 18108 ACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCTCCCCCG 18167
Query 146689 CGAATGCCGCCTTGAGAACAAGATTTAACAGAAGCTAAGTGAGTTTTCCAGAATGGAATA 146748
|| | |||||||| || || ||||| || | | | | | ||| | || ||||||
Sbjct 18168 CGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAAGGAATA 18227
Query 146749 ACGCCTGTATGACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCACGATACATTCCA 146808
||| |||||| | ||||| ||| ||| ||| || || | | ||
Sbjct 18228 CAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATCTTGCCG 18287
Query 146809 GCATTAACACCAATACCGGCACGTTTGCTGATATATTTGATGATTGCTTTGTTTACTGCG 146868
||||||| |||||||||||||||| || ||||| | || || || ||
Sbjct 18288 GCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCGGTGGCA 18347
Query 146869 TTAATACTGTCAAGACTATCGCCACCTTCAATAACAACGCAAGAACTGAACTGGCGAGTC 146928
|| || ||| | |||||| ||| || || | || ||||| || || || || ||
Sbjct 18348 TTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACGGGTT 18407
Query 146929 GGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAAT 146969
|| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct 18408 GGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT 18448
>seq11528
Length=3627
Score = 86.0 bits (94), Expect = 7e-12
Identities = 66/77 (86%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 74902 TGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTAACC 74961
||||||||| | | ||||||||| | |||||| ||||||||||||| |||||||||||
Sbjct 135 TGGTGGCCCCTCCCCGATTTGAACGGGGGACCAAACGATTATGAGTCGTCTGCTCTAACC 76
Query 74962 ATCTGAGCTAAAGGGCC 74978
| ||||||||| |||||
Sbjct 75 A-CTGAGCTAAGGGGCC 60
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539860457695480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |