Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_019910.1 Length=159624 Score E Sequences producing significant alignments: (Bits) Value seq7918 95.1 1e-14 >seq7918 Length=32631 Score = 95.1 bits (104), Expect = 1e-14 Identities = 195/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Minus Query 73413 CTTCCCACCCCGATTATGGCAGGTGTTCGTACTCCTACCCGTCAGTTCAGTTCCTGTGTC 73472 || || || ||||||||||| ||||||||||| || |||||||| || || || ||||| Sbjct 18442 CTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGCTCTTGTGTG 18383 Query 73473 CTGATCAAAACTGGTGACACCCTGGACTCTATCAACGCAACGGCCAAGACCATCGTTGAC 73532 | ||| | || || | | ||||| ||||| || || |||| |||| || | Sbjct 18382 TTAATCGAGTGTGCAGATAGTTTAGACTCCATCAATGCCACCGCCAGTGCCATTGTGAAA 18323 Query 73533 TATGTGTCCAAACGCGCAGGTATCGGCTTCGACGTCGGGGCTATCCGTGGGATTGGCAGT 73592 || || || |||| || ||||| || | | | ||| ||||| | | ||||| Sbjct 18322 TACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCCTTAGGCAGC 18263 Query 73593 CCTATTCGCGGCGGAGAGATGGTTCACACAGGCCTGATCCCATTCATCAAGTATCTCACT 73652 || ||||||||||| ||| |||| || ||| || || || ||| || || Sbjct 18262 CCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTACAAACATTTCCAA 18203 Query 73653 GGGGCGCTCAAGTCGTGCTCCCAGGGCGGCATTCGTGGTGGTGCGGCAAC 73702 || |||| ||||||||||| ||||| | || || || || || || Sbjct 18202 ACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTAC 18153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 510479361025280