Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_019925.1 Length=152427 Score E Sequences producing significant alignments: (Bits) Value seq7918 100 3e-16 >seq7918 Length=32631 Score = 100 bits (110), Expect = 3e-16 Identities = 196/290 (68%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 51512 GTCGCTGCACCGCCGCGAATGCCGCCCTGAGAGCACGACTTGAGCGCCCCAGTGAGATAC 51571 || || || || ||||| | ||||| || |||||||| |||| || || || Sbjct 18153 GTAGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGT 18212 Query 51572 TTGATGAACGGGATCAGGCCTGTGTGAACCATCTCTCCGCCGCGAATAGGACTACCAATA 51631 ||| || || || ||| || |||| ||| ||||||||||| || || || | Sbjct 18213 TTGTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAG 18272 Query 51632 CCACGGATTGCCCCGAAGTCGAAACCGATACCAGCGCGTTTTGACACATAGTCAACGATG 51691 | ||||| ||| | | || ||||| || |||| || || || | || ||| Sbjct 18273 GCGCGGATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATG 18332 Query 51692 GTCTTGGCCGTTGCGTTGATAGAGTCCAGGGTGTCACCAGTCTTGATCAACACACATGAG 51751 | |||| || || ||||| ||||| | | || || || ||| |||||||| ||| Sbjct 18333 GCACTGGCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAG 18392 Query 51752 CTGAACTGACGGGTAGGAGTACGAACACCGGCCATGATCGGGGTTGGAAG 51801 || || |||||||| || ||||||||||| ||||| ||||| || || || Sbjct 18393 CTAAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAG 18442 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 487457504440040