Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_019932.1 Length=29564 Score E Sequences producing significant alignments: (Bits) Value seq12298 84.2 4e-12 >seq12298 Length=10051 Score = 84.2 bits (92), Expect = 4e-12 Identities = 91/121 (75%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 2652 GCGCTTTGTGGCTTCCGGCCAGCTGGCATCCCAGCGGTCAACCGACCAGGCCCAGGCGAG 2711 ||| || || ||||| |||||| ||| |||||| || || ||||| | |||||||||||| Sbjct 8399 GCGTTTGGTAGCTTCTGGCCAGTTGGGATCCCAACGATCTACCGAACGGGCCCAGGCGAG 8458 Query 2712 ATACGGCAGCAGCTCAACCGGGCAGGTCTGCGCGTTCCACAGTTTGCGCAGCGGCACCGG 2771 ||| ||||||||| | | |||||| | || | |||| || | | | ||||| ||| Sbjct 8459 ATAGGGCAGCAGCGCTAAGGGGCAGTGTTCCGGGCTCCAGAGCTGGGTAATCGGCAGCGG 8518 Query 2772 A 2772 | Sbjct 8519 A 8519 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 94449902762124