Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_020416.1
Length=160221
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 129 6e-25
>seq7918
Length=32631
Score = 129 bits (142), Expect = 6e-25
Identities = 268/398 (67%), Gaps = 6/398 (2%)
Strand=Plus/Plus
Query 133805 CCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAATACCAAC 133864
|| ||||| ||||| || | || ||||| || || || ||||| ||||| || |||
Sbjct 18054 CCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTTTTTAACACTAAC 18113
Query 133865 AGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGTACA 133924
||| ||| || || ||||||| | ||||| | || ||||| || || || || |||
Sbjct 18114 AGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCTCCCCCGCGCACA 18173
Query 133925 CCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATTACGCCA 133984
|||||||| || || ||||| || || || || |||||||| | |||||||| |||
Sbjct 18174 CCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAAGGAATACAGCCG 18233
Query 133985 GTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCGGCGTTG 134044
||||| | || || | ||| |||| || || ||| | ||||| ||
Sbjct 18234 GTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATCTTGCCGGCATTA 18293
Query 134045 ATGCCGATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTTGC---CGCATTA 134101
|| || ||||| || || | || || || | || || ||| || |||||
Sbjct 18294 ATCCCAATACCGGCACGTTGAGAGACGTATTTCACAA---TGGCACTGGCGGTGGCATTG 18350
Query 134102 ATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTAGGA 134161
|| || | | ||| || || || | |||||||| ||||| ||||| || ||
Sbjct 18351 ATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACGGGTTGGG 18410
Query 134162 GTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAAT 134199
|||||| | || ||||||||||| ||||||| |||||
Sbjct 18411 GTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT 18448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 512389052338520
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |