Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_020416.1 Length=160221 Score E Sequences producing significant alignments: (Bits) Value seq7918 129 6e-25 >seq7918 Length=32631 Score = 129 bits (142), Expect = 6e-25 Identities = 268/398 (67%), Gaps = 6/398 (2%) Strand=Plus/Plus Query 133805 CCGTAATCTAGATGACGAATGCGGTTTTCATCTACACCTTTGTTGTTCTTTAATACCAAC 133864 || ||||| ||||| || | || ||||| || || || ||||| ||||| || ||| Sbjct 18054 CCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTTTTTAACACTAAC 18113 Query 133865 AGGTTTTCAACCTCAAGATGCCACATTGGATAATAAAGAGTAGCTGCACCACCACGTACA 133924 ||| ||| || || ||||||| | ||||| | || ||||| || || || || ||| Sbjct 18114 AGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCTCCCCCGCGCACA 18173 Query 133925 CCGCCTTGAGAACAAGATTTTACTGCAGTCTGAAAATGTTTCCAGAAAGGAATTACGCCA 133984 |||||||| || || ||||| || || || || |||||||| | |||||||| ||| Sbjct 18174 CCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAAGGAATACAGCCG 18233 Query 133985 GTATGTTTTACTTCGCCATTACCAATTTTTGAGCCTTCAGCTCGAATCATACCGGCGTTG 134044 ||||| | || || | ||| |||| || || ||| | ||||| || Sbjct 18234 GTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATCTTGCCGGCATTA 18293 Query 134045 ATGCCGATACCAGCTCGCTTGCTGATATACTTAATAATACTGTTACTTGC---CGCATTA 134101 || || ||||| || || | || || || | || || ||| || ||||| Sbjct 18294 ATCCCAATACCGGCACGTTGAGAGACGTATTTCACAA---TGGCACTGGCGGTGGCATTG 18350 Query 134102 ATAGAATTCAGTGAATCGCCAGCTTCAATAACTACACAAGAACTAAACTGACGAGTAGGA 134161 || || | | ||| || || || | |||||||| ||||| ||||| || || Sbjct 18351 ATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACGGGTTGGG 18410 Query 134162 GTACGAGCCCCTGCCATAATCGGTGTAGGCAATGAAAT 134199 |||||| | || ||||||||||| ||||||| ||||| Sbjct 18411 GTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT 18448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 512389052338520