Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq19326 86.0 7e-12 >seq19326 Length=6529 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Plus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| | || |||||| | ||||| ||||||||||| ||||| |||||| ||| | Sbjct 3547 TGGAGAATAAGGGAGTCGAACCCTTGACCTCCTGCGTGCAAGGCAGGCGCTCTAGCCAGC 3606 Query 35881 TGAGCTAATTCCCC 35894 |||||||||||||| Sbjct 3607 TGAGCTAATTCCCC 3620 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571842189269640