Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_021344.2
Length=176227
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 136 4e-27
>seq7918
Length=32631
Score = 136 bits (150), Expect = 4e-27
Identities = 273/405 (67%), Gaps = 0/405 (0%)
Strand=Plus/Minus
Query 41648 TCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGC 41707
||| | ||||| || |||||||| ||||| ||||| || || ||||| ||| | |||
Sbjct 18445 TCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGCTCTTGT 18386
Query 41708 GTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTG 41767
|| | || || | | ||| | | || | ||||| || ||| || |||
Sbjct 18385 GTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAATGCCACCGCCAGTGCCATTGTG 18326
Query 41768 AAGTATATTTCACAACGTGCTGGTATCGGTGTAAACGCCGGACATATTCGCGCGATGGGT 41827
|| || | || |||||||| ||||| || | || ||||| | || ||||| | ||
Sbjct 18325 AAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCCTTAGGC 18266
Query 41828 TCTAAAATCCGTGGTGGTGAAGCAGTTCATACAGGCGTGATCCCGTTCTGGAAACATATT 41887
|| || || ||||| || ||||||| ||| || || || | |||||| |
Sbjct 18265 AGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTACAAACATTTC 18206
Query 41888 CAGACAGCGGTTAAATCCTGTTCACAAGGTGGTGTTCGTGGTGGTGCTGCAACGTTGTAT 41947
|| ||||| || ||||| || || ||||| ||||| || || || || || || | |
Sbjct 18205 CAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTACCCTCTTC 18146
Query 41948 TATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTT 42007
|||||| | |||||| ||||| ||| |||| | || | |||||||| || |||
Sbjct 18145 TATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAATCGGGGCGTT 18086
Query 42008 GAAAACAACCGTATCCGTCACCTGGATTATGGCGTACAGCTTAAC 42052
|| | || || | || || ||||||||||| |||||||| |||
Sbjct 18085 GAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAAC 18041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 563589251936040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |