Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_021531.1 Length=223989 Score E Sequences producing significant alignments: (Bits) Value seq15550 120 4e-22 >seq15550 Length=6095 Score = 120 bits (132), Expect = 4e-22 Identities = 144/196 (73%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 98884 AAGGAACGACTATGAAACAGTATCAAGATTTAATGGCTGAAGTCTTTGCGAAAGGTACGC 98943 ||||||| ||||| ||||||| | | || ||||| | || | || ||| | | Sbjct 2924 AAGGAACCCCTATGCAACAGTACCTAACCTTGATGGCGCATATCCTGCATAATGGTTCCC 2865 Query 98944 CGAAGAAAGACCGTACCGGTACAGGCACGCTTTCTATCTTCGGCCACCAGATGCGTTTCA 99003 || ||| ||||| || || ||||| |||||||||||| |||||||||| || | Sbjct 2864 GCAAACCAGATCGTACTGGGGTGGGAACGCTCTCTATCTTCGGCTACCAGATGCGCTTTA 2805 Query 99004 ACTTGCAAGAAGGTTTCCCGCTGGTAACGACCAAGCGTTGCCACCTGCGCTCTATTATCC 99063 |||||||||| || || || |||| || ||||| || ||||| || || || ||||| Sbjct 2804 ACTTGCAAGAGGGCTTTCCATTGGTCACCACCAAACGGTGCCATCTACGTTCAATTATTT 2745 Query 99064 ATGAACTGCTGTGGTT 99079 |||||||||||||||| Sbjct 2744 ATGAACTGCTGTGGTT 2729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716370954621080