Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_021536.1
Length=171797
Score E
Sequences producing significant alignments: (Bits) Value
seq29583 89.7 6e-13
seq19326 86.0 7e-12
>seq29583
Length=6804
Score = 89.7 bits (98), Expect = 6e-13
Identities = 64/74 (86%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 9772 TGGGGAATTAGCTCAGTTGGTAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831
||||| ||||||||||||||||||||||| ||||||||||| | |||||||||||||
Sbjct 6704 TGGGGGCATAGCTCAGTTGGTAGAGCGCCTGTTTTGCAAGCAGAAGGTCAGCGGTTCGAC 6763
Query 9832 TCCGCTATTCTCCA 9845
|||||| |||||
Sbjct 6764 TCCGCTTGCCTCCA 6777
>seq19326
Length=6529
Score = 86.0 bits (94), Expect = 7e-12
Identities = 64/74 (86%), Gaps = 1/74 (1%)
Strand=Plus/Minus
Query 9773 GGGGAATTAGCTCAGTTGG-TAGAGCGCCTGCTTTGCAAGCAGGATGTCAGCGGTTCGAG 9831
||||||||||||||| ||| |||||||||||| ||||| |||||| |||| |||||||
Sbjct 3620 GGGGAATTAGCTCAGCTGGCTAGAGCGCCTGCCTTGCACGCAGGAGGTCAAGGGTTCGAC 3561
Query 9832 TCCGCTATTCTCCA 9845
||| |||||||||
Sbjct 3560 TCCCTTATTCTCCA 3547
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 549418510700440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |