Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_021924.1
Length=129052
Score E
Sequences producing significant alignments: (Bits) Value
seq5577 208 6e-49
seq3668 89.7 4e-13
>seq5577
Length=36082
Score = 208 bits (230), Expect = 6e-49
Identities = 316/450 (70%), Gaps = 0/450 (0%)
Strand=Plus/Plus
Query 34194 ATATTGTGCCGGCGGGTTTTTCAGTATGAAGGTGTTGAGCTTATGCGAGAAGTGTAGCGT 34253
|| ||||| || || ||||||| || || || || | |||||| | | || |
Sbjct 6594 ATTTTGTGTTGGTGGATTTTTCAAAATAAAAGTATTTACTTTATGCTGAACTTTTATCAA 6653
Query 34254 GCCGTGATAACCGCATGCTTTGCAGCCCTGACAGATAATGTTCTTTTTAGCGGACACGAT 34313
|| ||||||||||| || || || | || | || || | |||||||||| || |
Sbjct 6654 TCCATGATAACCGCAAGCCTTACAACTTTGCGAAATTATTTCCTTTTTAGCGACAACAGT 6713
Query 34314 GAGCTCAGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATC 34373
| || || || || ||||||||||| |||||||| ||| |||| || |||||||||||
Sbjct 6714 TAAGTCCGTTTCAGGATTGTCACATTCTGGACACAAGACATACTTTCGAATGAAACCATC 6773
Query 34374 AAGCAGGTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTT 34433
||||| ||| || || ||| | || || || || |||||||| || || || |||||
Sbjct 6774 AAGCAAGTCTTGCAATTTAGTTGCATCATGCGATCCATTGACGATAAAACGCTCATTTTT 6833
Query 34434 GTAATCGACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGTCGGGTAAATGGC 34493
| ||| | ||| ||||| || || || || || || || || ||||| || || | ||
Sbjct 6834 ATGATCAAACTGAGTTTGAGCTCCAAGTTCACATCCAAAATATTTTGTTGGATATGTTGC 6893
Query 34494 CGGACGTCCAAGCGCCTTGGCGATTTCGGGCATGTTGACGATGACAGTCTTGATGCCGTT 34553
|| || | ||||| || | ||| | |||||| ||||||||||| || || || ||
Sbjct 6894 TGGGCGATTTAATGCCTTTGCAACTTCTGCCATGTTAACGATGACAGTTTTAATTCCATT 6953
Query 34554 GCCCTTTCCTTCGACCTTGGCGCAGATGCGCGGCATTTTGTAGCGGTAGAACGCGTCCGC 34613
|| || || || || ||||| | || || |||||||| ||||| || | ||| |
Sbjct 6954 TCCTTTACCCTCAACTTTGGCCAAAATTCGGGGCATTTTATAGCGATAATAAAGGTCAGT 7013
Query 34614 CACATTGCGGTTAACGTTCACAGTCCCCAT 34643
||||| || || || || | |||||||||
Sbjct 7014 AACATTACGATTGACATTTAAAGTCCCCAT 7043
>seq3668
Length=32275
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCT 110329
|| |||||||| || |||||||| ||||| || |||||||| || | ||| ||||||
Sbjct 30671 AAGATGCAAATCTTCGTCAAAACATTAACTGGTAAAACCATCACTTTGGAAGTTGAGCCT 30730
Query 110330 GACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGAT 110389
|| ||| ||| | || || ||||| ||||||||||| | || |||
Sbjct 30731 TCTGACACTATCGAAAATGTCAAGGCAAAGATCCAAGACAAAGAAGGAATTCCACCAGAT 30790
Query 110390 CAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTAC 110449
|||||| | | || | || |||||||| |||| |||| | ||| || || |||
Sbjct 30791 CAACAACGTTTAATCTTCGCTGGTAAACAATTGGAAGATGGACGTACATTGAGTGACTAC 30850
Query 110450 AACATTCAAAAAGAATCTACGTTGCACATGGT 110481
|| || ||||| ||||| || ||||| ||||
Sbjct 30851 AATATCCAAAAGGAATCAACATTGCATTTGGT 30882
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 412692279966761
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |