Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_022058.1 Length=52519 Score E Sequences producing significant alignments: (Bits) Value seq20099 86.0 2e-12 >seq20099 Length=4024 Score = 86.0 bits (94), Expect = 2e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Minus Query 4246 TAGCTCAGTCGGTAGAGCTGCGGACTCTTAATCCGTAGGTCGCAGGTTCGATCCCTGCCT 4305 ||||||||| |||||||| ||||||||||||||||||||||| |||||||| |||| | Sbjct 1757 TAGCTCAGTTGGTAGAGCAGCGGACTCTTAATCCGTAGGTCGAAGGTTCGAGCCCTTCAC 1698 Query 4306 GCCCCAC 4312 | ||||| Sbjct 1697 GACCCAC 1691 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 167880015811794