Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_022750.1 Length=33628 Score E Sequences producing significant alignments: (Bits) Value seq11528 141 2e-29 >seq11528 Length=3627 Score = 141 bits (156), Expect = 2e-29 Identities = 168/228 (74%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 26100 CATCGGGTACTGTTTATGCCACTGGACAGACTGATCGCGACACTGATGAAAGCGAAACAG 26159 || ||| ||||||| |||||||| || | | || | ||||| || || || || Sbjct 2846 CACCGGTTACTGTTCATGCCACTAGATCGGTTAATTAGTGCTCTGATAAAGGCCAAGCAA 2905 Query 26160 GAAAACCGGCTGGAGCGTCAGCTACAGCAACTGAGTTATGCCCGGGTGTTGATCCTGGAT 26219 ||||| ||| | ||||| ||||| ||||| || | |||||| | ||| |||| ||||| Sbjct 2906 GAAAATCGGTTAGAGCGCCAGCTCCAGCAGCTCTGCTATGCCAGAGTGCTGATATTGGAT 2965 Query 26220 GAAATAGGCTATCTGCCGATGAACAGAGAGGAAGCCAGTCTGTTCTTCCGGCTACTGAAC 26279 || | |||||||| |||||||| | || || ||||| || || ||| || |||| | | Sbjct 2966 GAGTTCGGCTATCTACCGATGAATCGTGAAGAGGCCAGCCTATTTTTCAGGTTACTCAGC 3025 Query 26280 CGTCGATATGAAAAAGCGAGCATCATACTGACGTCAAACAAAGGGTTC 26327 | || ||||||||||| |||||||| || ||||| || ||| | ||| Sbjct 3026 AGGCGCTATGAAAAAGCCAGCATCATCCTAACGTCTAATAAAAGTTTC 3073 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107450119683660