Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_023561.1
Length=173276
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 140 4e-28
>seq7918
Length=32631
Score = 140 bits (154), Expect = 4e-28
Identities = 281/417 (67%), Gaps = 0/417 (0%)
Strand=Plus/Plus
Query 145936 CAGGTCGTTGATTTGAACACCGTAATCCAAGTGACGAATTCGGTTTTCATCTACGCCTTT 145995
||| | ||| | || || || ||||||| || || | || ||||| || |||||
Sbjct 18035 CAGTTTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCG 18094
Query 145996 GTTGTTCTTGAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAATGT 146055
||||| || | || | ||| ||| ||||| ||||| | |||||| | | ||
Sbjct 18095 ATTGTTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGT 18154
Query 146056 CGCCGCGCCACCGCGAACTCCACCTTGGGAGCAAGACTTAACTGCTGTTTGGATGTGTTT 146115
|| || || ||||| || || ||||||||||| || || || |||||||||| |||||
Sbjct 18155 AGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTT 18214
Query 146116 CCAGAAAGGAATAACTCCAGTATGCTTGACTTCTCCGAAGCCGATTTTTGAACCTTCTGC 146175
| ||||||||| || ||||| | | || ||| || || ||| ||
Sbjct 18215 GTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGC 18274
Query 146176 ACGAATCATACCTGCGTTAATGCCGATACCAGCACGTTTAGAGATGTACTCTACAATTGA 146235
|| ||| | || || ||||| || ||||| ||||||| ||||| ||| | ||||| |
Sbjct 18275 GCGGATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGC 18334
Query 146236 TTCAGCAGATTTGTTAATTGATTTCAGTGAATCACCAGCTTCAATAACAACGCAAGAACT 146295
|| | || || || | | ||| || || || | || ||||| ||
Sbjct 18335 ACTGGCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCT 18394
Query 146296 GAATTGACGAGTAGGAGTACGAGCACCTGCCATAATAGGAGTAGGCAGAGAAATTTT 146352
|||||||| || || |||||| |||| |||||||| ||||||||||| ||||||||
Sbjct 18395 AAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAATTTT 18451
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 554149555009120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |