Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_023613.1
Length=204815
Score E
Sequences producing significant alignments: (Bits) Value
seq3947 129 8e-25
>seq3947
Length=2916
Score = 129 bits (142), Expect = 8e-25
Identities = 281/412 (68%), Gaps = 13/412 (3%)
Strand=Plus/Plus
Query 180554 GGTGATTTAGGACCAATTTATGGATTTCAATGGAGACATGCAGGAGCTCAATATATTGAC 180613
|||||||| || ||| ||||||||||||||||| | ||| || || ||||||| |||
Sbjct 1122 GGTGATTTGGGTCCAGTTTATGGATTTCAATGGCGTCATTTTGGTGCCCAATATAA-GAC 1180
Query 180614 -TGTGATACCAACTATATCGGGCAAGGTATAGACCAATTAAGCCAAGTTATAGAAACTAT 180672
|| ||| | ||| | ||||| || || ||||||| | ||||| ||| ||
Sbjct 1181 ATGCGATCATGAATATGACAAACAAGGAATTGATCAATTAAAAGATGTTATTGAACGCAT 1240
Query 180673 AAAAAATAATCCCGAATGC-CGAAGAATAATCATAGATAGTTGGAATGTATCACAATTAC 180731
||| |||||| |||| ||| |||| || || | |||||| | | | |
Sbjct 1241 TAAATCTAATCCA-AATGATCGACGAATTATTTTAAGTGCCTGGAATCCAGTGGATATTC 1299
Query 180732 CAGATATGGCTCTTCCACCATGTCACTGTTTGGTACAATTTTATGTTAGAAATAAAATTT 180791
|| | ||||| |||||||||||||| ||| ||||||| |||||||| ||||
Sbjct 1300 CACAAATGGCACTTCCACCATGTCATTGTCTGGTACAGTTTTATGTCGCAAAT---GGCG 1356
Query 180792 ATTTAGATTGCCAATTGTATCAAAGATCTGCAGATTTAGGATTAGGTGTACCATATAATA 180851
| || ||||||||| || |||||||| || ||| | || | || || || | |||||
Sbjct 1357 AGTTGAGTTGCCAATTATACCAAAGATCAGCTGATATGGGTCTCGGAGTTCCTTTTAATA 1416
Query 180852 TTGCTTTCTATTCATTTTTG--GTATGTGTTCTCTCAAAGTGGTGC-AATTTAACCCCTG 180908
| || | || | | ||| ||| || | |||| || | | ||||||| ||||
Sbjct 1417 TCGCATCATACGCTCTATTGACGTACATGATTGCTCA---TGTTACAAATTTAAAGCCTG 1473
Query 180909 GAAAATTTATTCACACTTTTGGGGATGTTCATGTATATTCTAACCATATTGA 180960
| | ||| |||| |||||||| |||| |||| | || | || || |||||
Sbjct 1474 GCGATTTTGTTCATACTTTTGGTGATGCTCATATTTACACGAATCACATTGA 1525
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 655036915693000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |