Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_024121.1 Length=167266 Score E Sequences producing significant alignments: (Bits) Value seq7918 102 9e-17 >seq7918 Length=32631 Score = 102 bits (112), Expect = 9e-17 Identities = 204/296 (69%), Gaps = 6/296 (2%) Strand=Plus/Plus Query 138042 GGATCAGTGCAAACGTTGCGCATGATGTGGGTGTAAGAACGAGAGTGAATGGTCTCAGAG 138101 |||||| || || ||||| |||||||| || || ||||| ||||||||||| || || Sbjct 15704 GGATCATTGACAATATTGCGAATGATGTGAGTATAGGAACGGGAGTGAATGGTTTCTGAA 15763 Query 138102 AATGTCCAAGTCTGAATCCATGTTTCAAG-TCCAACA-TCAGAACAGATATCAGCGAATG 138159 || | |||||| | ||||| |||||||| || || | ||| ||| | | || | Sbjct 15764 AAGGCCCAAGTTTCGATCCAGGTTTCAAGCTCTGGCAGTGAGACCAGGGGTAA--AAAAG 15821 Query 138160 CGATAGCAGGTGCT-CGTCCTTGAACTGAATCAAGGAGTGTTTGATATTTCAAGTTGTTG 138218 ||| | ||| ||| || ||||||| ||||| || || ||||| ||||| | ||| | Sbjct 15822 CGACATTAGG-GCTGCGCCCTTGAATCGAATCCAGCAGGGTTTGGTATTTTAGATTGCTA 15880 Query 138219 GTGAAAATGCCTTGATCGTTTTCAGACATTTTCTGGAATTGAACACGATCTTTGGATACG 138278 | ||||| || || | || | | |||| | | | ||||| || || Sbjct 15881 ATAAAAATATGCTGTTCATGAGGAGGTAGCTGCTGGTAGTCGATGCGATCACGCGAGACA 15940 Query 138279 TCTACTTCTTCTGGACGCCAAAAGAAGGAGAGTTGCTTTTCAGTCAACTTTTCAAA 138334 || || |||||||| |||||||| || ||||| || |||||| | ||| ||||| Sbjct 15941 TCAACCTCTTCTGGGCGCCAAAAAAAAGAGAGCTGTTTTTCAATTAACCGCTCAAA 15996 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 534924689359920