Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_024121.1
Length=167266
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 102 9e-17
>seq7918
Length=32631
Score = 102 bits (112), Expect = 9e-17
Identities = 204/296 (69%), Gaps = 6/296 (2%)
Strand=Plus/Plus
Query 138042 GGATCAGTGCAAACGTTGCGCATGATGTGGGTGTAAGAACGAGAGTGAATGGTCTCAGAG 138101
|||||| || || ||||| |||||||| || || ||||| ||||||||||| || ||
Sbjct 15704 GGATCATTGACAATATTGCGAATGATGTGAGTATAGGAACGGGAGTGAATGGTTTCTGAA 15763
Query 138102 AATGTCCAAGTCTGAATCCATGTTTCAAG-TCCAACA-TCAGAACAGATATCAGCGAATG 138159
|| | |||||| | ||||| |||||||| || || | ||| ||| | | || |
Sbjct 15764 AAGGCCCAAGTTTCGATCCAGGTTTCAAGCTCTGGCAGTGAGACCAGGGGTAA--AAAAG 15821
Query 138160 CGATAGCAGGTGCT-CGTCCTTGAACTGAATCAAGGAGTGTTTGATATTTCAAGTTGTTG 138218
||| | ||| ||| || ||||||| ||||| || || ||||| ||||| | ||| |
Sbjct 15822 CGACATTAGG-GCTGCGCCCTTGAATCGAATCCAGCAGGGTTTGGTATTTTAGATTGCTA 15880
Query 138219 GTGAAAATGCCTTGATCGTTTTCAGACATTTTCTGGAATTGAACACGATCTTTGGATACG 138278
| ||||| || || | || | | |||| | | | ||||| || ||
Sbjct 15881 ATAAAAATATGCTGTTCATGAGGAGGTAGCTGCTGGTAGTCGATGCGATCACGCGAGACA 15940
Query 138279 TCTACTTCTTCTGGACGCCAAAAGAAGGAGAGTTGCTTTTCAGTCAACTTTTCAAA 138334
|| || |||||||| |||||||| || ||||| || |||||| | ||| |||||
Sbjct 15941 TCAACCTCTTCTGGGCGCCAAAAAAAAGAGAGCTGTTTTTCAATTAACCGCTCAAA 15996
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534924689359920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |