Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_024124.2 Length=169148 Score E Sequences producing significant alignments: (Bits) Value seq7918 86.0 7e-12 >seq7918 Length=32631 Score = 86.0 bits (94), Expect = 7e-12 Identities = 130/185 (70%), Gaps = 0/185 (0%) Strand=Plus/Minus Query 27452 CATACGGGTGTTATTCCATTCTGGAAACATTTCCAAACTGCAGTAAAATCTTGTTCTCAA 27511 ||||| || |||||| || | |||||||||||||| || || ||||| || || ||| Sbjct 18238 CATACCGGCTGTATTCCTTTTTACAAACATTTCCAAACAGCCGTCAAATCGTGCTCCCAA 18179 Query 27512 GGTGGTATTCGTGGTGGTGCTGCTACAGCGTATTATCCGATGTGGCACTTAGAAGTAGAG 27571 || ||| | || || || || ||||| | |||||| | ||||| |||||||| Sbjct 18178 GGCGGTGTGCGCGGGGGAGCCGCTACCCTCTTCTATCCGCTATGGCATCGCGAAGTAGAA 18119 Query 27572 AACCTATTAGTTCTGAAAAATAATAAAGGTGTGGATGAAAACCGTATTCGACATATGGAC 27631 ||| ||||| | ||||| ||| || || || ||||| || | || ||| |||| Sbjct 18118 GCCCTGTTAGTGTTAAAAAACAATCGGGGCGTTGAGGAAAATCGGGTACGCCATCTGGAT 18059 Query 27632 TACGG 27636 || || Sbjct 18058 TATGG 18054 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 540944855275360