Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_024625.1
Length=151109
Score E
Sequences producing significant alignments: (Bits) Value
seq8363 87.8 2e-12
>seq8363
Length=52898
Score = 87.8 bits (96), Expect = 2e-12
Identities = 143/201 (71%), Gaps = 4/201 (2%)
Strand=Plus/Plus
Query 133464 GTGGACTCTTTCTGTATATTGTAATCGCCCATCGTG-GACGAGTCCTCGAGCTGCTTGCC 133522
|| ||||||||||| |||||||| |||| || ||| | | | ||||| | || || ||
Sbjct 26359 GTTGACTCTTTCTGAATATTGTAGTCGCTCAATGTGCGTCCA-TCCTCTAATTGTTTACC 26417
Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTG-CT 133581
|| | || | || || || || ||||| || ||||| || || ||| ||| | ||
Sbjct 26418 GGCAAAGATCAATCGTTGTTGATCTGGAGGAATTCCTTCTTTATC-TTGAATTTTAGCCT 26476
Query 133582 TGAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAG 133641
| | | |||| |||||| | ||||| || |||| ||| | || || || |||| |
Sbjct 26477 TAACATTTTCAATCGTGTCCGATGGCTCGACTTCGAGGGTAATTGTCTTACCCGTCAAGG 26536
Query 133642 TTTTTACGAAAATCTGCATGG 133662
|||| ||||| ||||||||||
Sbjct 26537 TTTTGACGAAGATCTGCATGG 26557
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 483241469011480
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |