Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_025412.1
Length=369360
Score E
Sequences producing significant alignments: (Bits) Value
seq3668 109 1e-18
seq8363 98.7 2e-15
>seq3668
Length=32275
Score = 109 bits (120), Expect = 1e-18
Identities = 134/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 206184 CAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGACACAGTCGAATC 206243
|||||| | || || ||||| |||||||||||||| || ||||||||| |||||
Sbjct 30688 CAAAACATTAACTGGTAAAACCATCACTTTGGAAGTTGAGCCTTCTGACACTATCGAAAA 30747
Query 206244 AGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAAAGACTTATCTT 206303
|| ||| |||||| ||||| |||||||||||| || || ||| | | |||||
Sbjct 30748 TGTCAAGGCAAAGATCCAAGACAAAGAAGGAATTCCACCAGATCAACAACGTTTAATCTT 30807
Query 206304 CGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTCCAGAAAGAGTC 206363
||| || || || |||||||||||| | || ||| || ||||| |||| || || ||
Sbjct 30808 CGCTGGTAAACAATTGGAAGATGGACGTACATTGAGTGACTACAATATCCAAAAGGAATC 30867
Query 206364 TAC 206366
||
Sbjct 30868 AAC 30870
>seq8363
Length=52898
Score = 98.7 bits (108), Expect = 2e-15
Identities = 153/219 (70%), Gaps = 0/219 (0%)
Strand=Plus/Minus
Query 206173 CAGATATTTTGCAAAACGCTCACAGGAAAAACGATCACTTTGGAAGTGGAAAGTTCTGAC 206232
||||| || |||||| | || || || || || || | ||||| || || |||
Sbjct 26552 CAGATCTTCGTCAAAACCTTGACGGGTAAGACAATTACCCTCGAAGTCGAGCCATCGGAC 26493
Query 206233 ACAGTCGAATCAGTAAAGCAAAAGATTCAAGAAAAAGAAGGAATTTTGCCGGACGCTCAA 206292
|| | ||| || ||| || |||||||| |||||||||||| || || |||
Sbjct 26492 ACGATTGAAAATGTTAAGGCTAAAATTCAAGATAAAGAAGGAATTCCTCCAGATCAACAA 26433
Query 206293 AGACTTATCTTCGCCGGAAAGCAGTTGGAAGATGGAAGGACTTTGGCCGATTACAACGTC 206352
|| | ||||| ||||| || || || || |||||| | || ||| ||| ||||| |
Sbjct 26432 CGATTGATCTTTGCCGGTAAACAATTAGAGGATGGACGCACATTGAGCGACTACAATATT 26373
Query 206353 CAGAAAGAGTCTACTCTTCACCTTGTTTTGAGACTTCGA 206391
||||||||||| || |||||| | || ||| | ||||||
Sbjct 26372 CAGAAAGAGTCAACACTTCACTTAGTGTTGCGCCTTCGA 26334
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1181371428521517
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |