Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_025425.1
Length=163424
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 176 5e-39
>seq7918
Length=32631
Score = 176 bits (194), Expect = 5e-39
Identities = 294/419 (70%), Gaps = 6/419 (1%)
Strand=Plus/Plus
Query 135354 CAGGTTATTAATCTGTACGCCGTAGTCAAGATGGCGAATGCGGTTATCTTCCACGCCCTT 135413
||| || || | |||||| || || || |||||||| | || || || || ||||||
Sbjct 18035 CAGTTTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCG 18094
Query 135414 ATTGTTCTTTAACACAATCAGACTTTCAAACTCTAAATGCCACATTGGGTAATAGAGAGT 135473
|||||| |||||||| | ||| ||| | || |||||| | || || |||| ||
Sbjct 18095 ATTGTTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGT 18154
Query 135474 CGCCGCCCCGCCACGAATACCGCCTTGTGAGCATGACTTAACGGCAGTCTGAAAATGTTT 135533
|| || || || || | ||||||||| ||||| || || ||||| || || ||||||||
Sbjct 18155 AGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTT 18214
Query 135534 CCAGAATGGGATAACGCCAGTATGACGAACTTCACCATGCC-CGATCTTAGAT-CCTTCC 135591
| || || ||| ||| |||||| | ||||| ||| ||| | | |||
Sbjct 18215 GTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACC--GCCGCGAATGGGGCTGCCTAAG 18272
Query 135592 GCGCGAATCATGCCAGCGTTGATACCGATACCCGCACGCTTGCTA-ATATACTTGATGAT 135650
||||| ||| |||| || || || || ||||| ||||| ||| | | || || | ||
Sbjct 18273 GCGCGGATCTTGCCGGCATTAATCCCAATACCGGCACG-TTGAGAGACGTATTTCACAAT 18331
Query 135651 TGCATTTGCTGTTTCGTTGATGCCCTGCAATGAGTCATCACTTTCAATCACCACACACGA 135710
||| | || || | |||||| | || || ||| || || | |||||| ||
Sbjct 18332 GGCACTGGCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGA 18391
Query 135711 ACTAAATTGGCGTGTTGGGGTACGCACACCAGCCATAATCGGAGTAGGCAGAGAGATTT 135769
|||||||| || ||||||||||| ||||| |||||||||||||||||||| || ||||
Sbjct 18392 GCTAAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAATTT 18450
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 522634850121280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |