Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_025449.1 Length=166783 Score E Sequences producing significant alignments: (Bits) Value seq7918 120 3e-22 >seq7918 Length=32631 Score = 120 bits (132), Expect = 3e-22 Identities = 276/413 (67%), Gaps = 12/413 (3%) Strand=Plus/Plus Query 138618 TTCAGCTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTT 138677 |||||||| || |||||||||| ||| || | || ||||| || ||||| || ||| Sbjct 18042 TTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTT 18101 Query 138678 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 138737 || || || | || ||| ||||| |||||| | ||||| | ||||| || Sbjct 18102 TTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCT 18161 Query 138738 CCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAA 138797 || || || | || || || || || ||||| || || || || |||||||| ||||| Sbjct 18162 CCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAA 18221 Query 138798 GGAATAACACCAGTATGACGTACTTCACCCATGCCAATCTTAGAACCTTCAGCACGAATC 138857 |||||| || |||||| | ||||| || ||| ||| || || ||| Sbjct 18222 GGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATC 18281 Query 138858 ATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAA---GCG 138914 | || | ||||| ||||| || || |||| ||||| |||| ||||| | | ||| Sbjct 18282 TTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCG 18341 Query 138915 GAAGCCTTATTGATAGACTTCAGCGAATCACCTGC---CTCAATAACAACGCATGAACTG 138971 | || |||||| || | | || | |||| ||| || | || || || || Sbjct 18342 GTGGC---ATTGATGGAGTCTA---AACTATCTGCACACTCGATTAACACACAAGAGCTA 18395 Query 138972 AACTGTCGAGTCGGAGTACGACAACCAGCCATAATAGGAGTTGGCAATGAAAT 139024 || || || || || |||||| ||| |||||||| ||||| |||| ||||| Sbjct 18396 AATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT 18448 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533379662719560