Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_027995.1
Length=41666
Score E
Sequences producing significant alignments: (Bits) Value
seq22402 107 5e-19
>seq22402
Length=4759
Score = 107 bits (118), Expect = 5e-19
Identities = 157/222 (71%), Gaps = 0/222 (0%)
Strand=Plus/Plus
Query 41238 GCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAG 41297
||||| || ||||| | ||||||| | ||||| ||| |||||| || | |||||
Sbjct 1 GCGGTGGCCAATCTTCGGCTCGCCACCTCAGAAAGTTGGCGTGATAAAGCCTCTGGCGAA 60
Query 41298 AAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCT 41357
|||| || ||||| ||||| || || || ||| | | | |||||||||||
Sbjct 61 CAGAAGGAGTTGACGGAGTGGCATCGTGTCGTGCTCTACCGACGTTTAGCAGAAATTGCC 120
Query 41358 AGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAA 41417
| || |||||||| || ||| |||||| | | ||||||| || | ||||||||||||
Sbjct 121 GGAGAGTACCTGCGTAAGGGTGCCAAGGTTTACCTTGAAGGTCGCTTACGAACGCGTAAA 180
Query 41418 TGGCAGGACCAGGCTGGCGTTGATCGCTACACCACTGAAATC 41459
||||| || || || || || || || ||||| || |||
Sbjct 181 TGGCAAGATCAAGCGGGGCAGGAGCGTTATACCACAGAGATC 222
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 133162655022072
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |