Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_027995.1 Length=41666 Score E Sequences producing significant alignments: (Bits) Value seq22402 107 5e-19 >seq22402 Length=4759 Score = 107 bits (118), Expect = 5e-19 Identities = 157/222 (71%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 41238 GCGGTTGCTAATCTAAGCATCGCCACAACTGAAAGCTGGAAGGATAAAACCACCGGCGAG 41297 ||||| || ||||| | ||||||| | ||||| ||| |||||| || | ||||| Sbjct 1 GCGGTGGCCAATCTTCGGCTCGCCACCTCAGAAAGTTGGCGTGATAAAGCCTCTGGCGAA 60 Query 41298 AAGAAAGAACAAACGGAATGGCACCGCGTTGTCATCTTCGGTAAGCTGGCAGAAATTGCT 41357 |||| || ||||| ||||| || || || ||| | | | ||||||||||| Sbjct 61 CAGAAGGAGTTGACGGAGTGGCATCGTGTCGTGCTCTACCGACGTTTAGCAGAAATTGCC 120 Query 41358 AGCGAATACCTGCGCAAAGGTAGCAAGGTGTTCATTGAAGGCAGCCTGCGAACGCGTAAA 41417 | || |||||||| || ||| |||||| | | ||||||| || | |||||||||||| Sbjct 121 GGAGAGTACCTGCGTAAGGGTGCCAAGGTTTACCTTGAAGGTCGCTTACGAACGCGTAAA 180 Query 41418 TGGCAGGACCAGGCTGGCGTTGATCGCTACACCACTGAAATC 41459 ||||| || || || || || || || ||||| || ||| Sbjct 181 TGGCAAGATCAAGCGGGGCAGGAGCGTTATACCACAGAGATC 222 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 133162655022072