Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq7918 159 4e-34 >seq7918 Length=32631 Score = 159 bits (176), Expect = 4e-34 Identities = 291/425 (68%), Gaps = 1/425 (0%) Strand=Plus/Plus Query 128636 CAGGTTATTAATCTGAACACCATAATCTAAATGACGAATACGGTTTTCATCTACACCTTT 128695 ||| || || | ||| || |||||||| | ||| || | || ||||| || || || Sbjct 18035 CAGTTTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCG 18094 Query 128696 GTTGTTCTTAAGTACGAGGAGGTTTTCAACTTCCAAGTGCCAGATTGGATAGTACAGTGT 128755 ||||| || | || | ||| ||| ||||| ||||| | |||||| | || || Sbjct 18095 ATTGTTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGT 18154 Query 128756 CGCCGCGCCACCACGGACTCCGCCTTGGGAGCAGGATTTAACTGCTGTTTGGAAGTGCTT 128815 || || || || || || |||||||||||||| ||||| || ||||||||||| || || Sbjct 18155 AGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTT 18214 Query 128816 CCAGAAAGGAATAACTCCAGTATGTTTGACTTCACCGAATCCAATTTTTGAACCTTCTGC 128875 | ||||||||| || ||||| | | |||||| | ||| ||| || Sbjct 18215 GTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGC 18274 Query 128876 ACGAATCATACCTGCATTAATACCAATACCTGCACGCTTACTGATGTATTTTGTAATTGA 128935 || ||| | || |||||||| |||||||| ||||| | | || |||||| ||| | Sbjct 18275 GCGGATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGC 18334 Query 128936 CGCAGCAGCTTCGTTAATTGAATTAAGACTATCACCGCCTTCAATAACCACGCATGAACT 128995 || | | || || || | | |||||| | | || || | ||| || || || Sbjct 18335 ACTGGCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCT 18394 Query 128996 AAACTGACGTGTCGGAGTACGAACACCAGACATAATTGGAGTTGGCAATGAAATCTTTTT 129055 ||| ||||| || || ||||||||||| | |||||| ||||| |||| ||||| ||| | Sbjct 18395 AAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT-TTTAT 18453 Query 129056 AGTAG 129060 || || Sbjct 18454 AGCAG 18458 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531876220647160