Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_028701.2 Length=33509 Score E Sequences producing significant alignments: (Bits) Value seq12298 95.1 3e-15 >seq12298 Length=10051 Score = 95.1 bits (104), Expect = 3e-15 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 12161 GGCGGGTGGTGGATTCGTGAAATTGGTCTGTTTGATAAAGACGGCGATATGATTGCCGTC 12220 ||||| |||||||| || |||||||||||||||||| | |||| || | ||| || Sbjct 7709 GGCGGTTGGTGGATCCGCGAAATTGGTCTGTTTGATGAGCACGGGGAGCTCTGTGCGGTG 7650 Query 12221 GCCAACTGTGCGGAAACCTATAAGCCGCAGTTACAGGAGGGAAGCGGGCGCGTGCAGGTG 12280 || ||||| | || ||||| ||||| || || | ||||| ||| || ||||||| Sbjct 7649 GCTAACTGCCCAGAGACCTACAAGCCCAAGCTAGAAGAGGGTGCCGGTCGAACGCAGGTG 7590 Query 12281 GTGCGCATGATTCTGATTGTCAGCAGTACTGCCGCCGTGACGCTGAAAATTGACCCTTCG 12340 | ||| || | |||| ||||||||| | | || || | || | ||||| || | Sbjct 7589 ATCCGCCTGGTCTTGATCGTCAGCAGTGCGACTGCTGTAGCCCTCACCATTGATCCAGCT 7530 Query 12341 GTAGTGCTGGCAACCCG 12357 || ||| | || ||||| Sbjct 7529 GTTGTGTTAGCCACCCG 7513 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 107069453883054