Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_028762.1
Length=161989
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 91.5 2e-13
>seq7918
Length=32631
Score = 91.5 bits (100), Expect = 2e-13
Identities = 260/396 (66%), Gaps = 8/396 (2%)
Strand=Plus/Plus
Query 137514 TGAACACCATAATCTAAATGACGAATACGGTTTTCTTCAATACCTTTATTATTTTTAAGA 137573
|| || |||||||| | ||| || | || ||||| |||| || ||| ||||| |
Sbjct 18048 TGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTTTTTAAC 18107
Query 137574 ACTAACAATTTTTCTAATTCAAGGTGCCACATTGGGTAATATAAAGTAGCAGAACCACCT 137633
||||||| ||||| ||| | ||||| | || || | | ||||| | || ||
Sbjct 18108 ACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCTCCCCCG 18167
Query 137634 CGAATCCCACCTTGGGAACATGATTTTACAGATGCC---AAATGGGTTTTCCAAAATGGA 137690
|| | || |||||||| || ||||| || | || ||||| ||| |||| |||
Sbjct 18168 CGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATG---TTTGTAAAAAGGA 18224
Query 137691 ATGACA-CCGGTATGGACAACTTCGCCAAATCCTATTTTAGACCCTTCAGCCCTATACAT 137749
|| ||| |||||||| | | || || | || ||| || | | |
Sbjct 18225 AT-ACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATCTT 18283
Query 137750 ACCGGCATTAATACCAATACCAGCTCTTTTAGAAATGTATTTTACAATAGCTGCATTTGT 137809
||||||||||| |||||||| || | || ||| | |||||| ||||| || ||
Sbjct 18284 GCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCGGT 18343
Query 137810 TTCATTAATAGAATCTAAAGAATCACCGCTATCAATAACTACGCAAGAACTAAATTGACG 137869
|||| || || |||||| ||| | | || || | || ||||| |||||||||||
Sbjct 18344 GGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACG 18403
Query 137870 TGTTGGGGTTCTTACACCAGACAAAATTGGTGTTGG 137905
|||||||| | ||||| | || ||| || || ||
Sbjct 18404 GGTTGGGGTACGAACACCCGCCATAATCGGAGTAGG 18439
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518044553581080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |