Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_028780.1
Length=167124
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 127 2e-24
>seq7918
Length=32631
Score = 127 bits (140), Expect = 2e-24
Identities = 275/410 (67%), Gaps = 6/410 (1%)
Strand=Plus/Minus
Query 22794 ATTTCATTGCCAACTCCTATTATGGCTGGTTGTCGTACTCCGACTCGACAGTTTAGTTCA 22853
||||| |||| ||||| |||||||| ||| |||||| || || || || ||||| ||
Sbjct 18448 ATTTCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGCTCT 18389
Query 22854 TGCGTTGTTATTGAGGCAGGTGATTCATTAAAGTCTATCAATAAGGCTTCCGC---TTCA 22910
|| || | || ||| | ||| ||| | || |||||| || |||| | |
Sbjct 18388 TGTGTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAAT---GCCACCGCCAGTGCC 18332
Query 22911 ATTGTTGAATATATCTCTAAACGCGCTGGAATTGGTATTAACGTTGGTATGATTCGTGCC 22970
||||| |||| ||||| |||| || || ||||| ||||| | || | ||| || |||
Sbjct 18331 ATTGTGAAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCC 18272
Query 22971 GAAGGTTCTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAA 23030
||| ||| || ||||| | ||||| || ||||||||||| |||
Sbjct 18271 TTAGGCAGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTACAAA 18212
Query 23031 CATTTTCAGACTGCTGTTAAATCATGTTCACAGGGCGGAATTCGTGGTGGCGCTGCTACT 23090
||||| || || || || ||||| || || || ||||| | || || || || |||||
Sbjct 18211 CATTTCCAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTACC 18152
Query 23091 GCTTATTATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAA 23150
| ||||| | |||||| ||||| ||| || | || || ||||| ||
Sbjct 18151 CTCTTCTATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAATCGG 18092
Query 23151 GGTGTAGAAGAAAACCGCATTCGTCATATGGATTATGGTGTTCAACTGAA 23200
|| || || ||||| || | || ||| |||||||||| || || |||||
Sbjct 18091 GGCGTTGAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAA 18042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 534470457925280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |