Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_028820.1
Length=162101
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 141 1e-28
seq11528 82.4 8e-11
>seq7918
Length=32631
Score = 141 bits (156), Expect = 1e-28
Identities = 272/401 (68%), Gaps = 0/401 (0%)
Strand=Plus/Plus
Query 140182 TGAACACCATAATCTAGGTGGCGAATACGGTTTTCATCAACACCTTTATTGTTCTTCAGT 140241
|| || |||||||| || ||||| | || ||||| ||||| || |||||| || |
Sbjct 18048 TGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTTTTTAAC 18107
Query 140242 ACGAGCAGGTTTTCTACTTCAAGATGCCAAATCGGATAGTACAAAGTAGCTGCGCCACCG 140301
|| | |||| ||||||||| ||||||| | ||||||| | | ||||| || || |||
Sbjct 18108 ACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCTCCCCCG 18167
Query 140302 CGAATGCCGCCTTGAGAACAAGATTTAACAGAAGCTAAGTGAGTTTTCCAGAATGGAATA 140361
|| | |||||||| || || ||||| || | | | | | ||| | || ||||||
Sbjct 18168 CGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAAGGAATA 18227
Query 140362 ACGCCTGTATGACGAACTTCACCAGCGCCAATCTTAGAACCTTCAGCACGATACATTCCA 140421
||| |||||| | ||||| ||| ||| ||| || || | | ||
Sbjct 18228 CAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATCTTGCCG 18287
Query 140422 GCGTTAACACCAATACCGGCACGTTTGCTGATATATTTGATGATTGCTTTGTTTACTGCA 140481
|| |||| |||||||||||||||| || ||||| | || || || |||
Sbjct 18288 GCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCGGTGGCA 18347
Query 140482 TTAATACTGTCAAGACTATCGCCGCCTTCAATAACAACGCAAGAACTGAACTGGCGAGTC 140541
|| || ||| | |||||| | | || || | || ||||| || || || || ||
Sbjct 18348 TTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTGACGGGTT 18407
Query 140542 GGAGTACGTACACCGGCCATAATTGGAGTAGGCAGAGAAAT 140582
|| ||||| ||||| |||||||| ||||||||||| |||||
Sbjct 18408 GGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT 18448
>seq11528
Length=3627
Score = 82.4 bits (90), Expect = 8e-11
Identities = 65/77 (84%), Gaps = 1/77 (1%)
Strand=Plus/Minus
Query 67178 TGGTGGCCCTTACTGGATTTGAACCAGTGACCAATCGATTATGAGTCGACTGCTCTATCC 67237
||||||||| | | ||||||||| | |||||| ||||||||||||| |||||||| ||
Sbjct 135 TGGTGGCCCCTCCCCGATTTGAACGGGGGACCAAACGATTATGAGTCGTCTGCTCTAACC 76
Query 67238 ATCTGAGCTAAAGGGCC 67254
| ||||||||| |||||
Sbjct 75 A-CTGAGCTAAGGGGCC 60
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 518402820628120
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |