Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_028847.1
Length=170527
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 116 4e-21
>seq7918
Length=32631
Score = 116 bits (128), Expect = 4e-21
Identities = 270/407 (66%), Gaps = 0/407 (0%)
Strand=Plus/Plus
Query 143920 GTTCATCTGGATTCCGTAGTCCATATGGCGAATACGGTTCTCATCGACACCTTTGTTGTT 143979
||||| ||| | || || |||| |||||| | || || || || || || |||||
Sbjct 18041 GTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTT 18100
Query 143980 TTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGC 144039
||| | || | ||| ||| ||||| |||||| | ||||| | ||||| ||
Sbjct 18101 TTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGC 18160
Query 144040 GCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTTCCAGAA 144099
|| || || | || ||||| || || ||||| || || || ||||||||||| | ||
Sbjct 18161 TCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAA 18220
Query 144100 TGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGCACGAAT 144159
|||||| |||||||| | | || || || ||| | ||| || || ||
Sbjct 18221 AGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGAT 18280
Query 144160 CATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGAGTTAGC 144219
| | || | || || |||||||||||||||| ||| | ||||| | || | | ||
Sbjct 18281 CTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGC 18340
Query 144220 AGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACTAAATTG 144279
|| || || || | | || | || || | ||||||||| ||||||||
Sbjct 18341 GGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAATTG 18400
Query 144280 ACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAA 144326
||||||||| ||||| | || |||||||| ||||| || | ||||
Sbjct 18401 ACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAA 18447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 545356018292040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |