Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_028957.1 Length=171541 Score E Sequences producing significant alignments: (Bits) Value seq7918 102 9e-17 >seq7918 Length=32631 Score = 102 bits (112), Expect = 9e-17 Identities = 268/409 (66%), Gaps = 0/409 (0%) Strand=Plus/Plus Query 142839 TTATTCAACTGGACGCCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 142898 || |||| ||| || ||||| |||| ||| | | || ||||| ||||||||| ||| Sbjct 18039 TTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTG 18098 Query 142899 TTCTTCAGAACGAGCAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 142958 || || | || | || ||| ||||| |||||||| ||||| | ||||| Sbjct 18099 TTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCG 18158 Query 142959 GCGCCGCCCCGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 143018 || || || || | || ||||| || || ||||| || || |||||||||||||| | Sbjct 18159 GCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAA 18218 Query 143019 AACGGAATAACACCAGTATGACGAACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 143078 || |||||| || |||||| | ||||| | || ||| || || Sbjct 18219 AAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGG 18278 Query 143079 ATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATATATTCGATGATTGAATTG 143138 ||| | || | || || || ||||| ||||| | | || |||| | || | | || Sbjct 18279 ATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTG 18338 Query 143139 GCAGTCTTATTGATTGACTTCAGGGAGTCTGCAGCTTCGATAACCACGCAGGAACTGAAC 143198 || || |||||| || | | |||||| ||||| | ||| || || || || Sbjct 18339 GCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAAT 18398 Query 143199 TGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAA 143247 || ||||| || || | | |||||||| || || || |||| ||||| Sbjct 18399 TGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAA 18447 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548599614592920