Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_028957.1
Length=171541
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 102 9e-17
>seq7918
Length=32631
Score = 102 bits (112), Expect = 9e-17
Identities = 268/409 (66%), Gaps = 0/409 (0%)
Strand=Plus/Plus
Query 142839 TTATTCAACTGGACGCCATAGTCCATATGTCTGATGCGGTTTTCTTCAACGCCCTTGTTG 142898
|| |||| ||| || ||||| |||| ||| | | || ||||| ||||||||| |||
Sbjct 18039 TTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTG 18098
Query 142899 TTCTTCAGAACGAGCAAATTTTCAACTTCCAAATGCCATAAAGGATAATAAGCAGTAGCA 142958
|| || | || | || ||| ||||| |||||||| ||||| | |||||
Sbjct 18099 TTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCG 18158
Query 142959 GCGCCGCCCCGGATTCCACCTTGTGAACAGGATTTAACAGCCGTTTGGAAATGTTTCCAG 143018
|| || || || | || ||||| || || ||||| || || |||||||||||||| |
Sbjct 18159 GCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAA 18218
Query 143019 AACGGAATAACACCAGTATGACGAACTTCACCCATACCGATTTTCGAACCTTCAGCACGA 143078
|| |||||| || |||||| | ||||| | || ||| || ||
Sbjct 18219 AAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGG 18278
Query 143079 ATCATACCAACGTTGATGCCGATACCCGCACGCTTACTGATATATTCGATGATTGAATTG 143138
||| | || | || || || ||||| ||||| | | || |||| | || | | ||
Sbjct 18279 ATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTG 18338
Query 143139 GCAGTCTTATTGATTGACTTCAGGGAGTCTGCAGCTTCGATAACCACGCAGGAACTGAAC 143198
|| || |||||| || | | |||||| ||||| | ||| || || || ||
Sbjct 18339 GCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAAT 18398
Query 143199 TGCCGGGTAGGTGTTCTGGCGCCCGCCATGATAGGTGTGGGCAACGAAA 143247
|| ||||| || || | | |||||||| || || || |||| |||||
Sbjct 18399 TGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAA 18447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 548599614592920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |