Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq3668 84.2 2e-11 >seq3668 Length=32275 Score = 84.2 bits (92), Expect = 2e-11 Identities = 99/134 (74%), Gaps = 0/134 (0%) Strand=Plus/Plus Query 27883 GACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGAC 27942 ||||||||||| |||| || || ||||| ||||| || || || ||||||||||| Sbjct 30767 GACAAAGAAGGAATTCCACCAGATCAACAACGTTTAATCTTCGCTGGTAAACAATTGGAA 30826 Query 27943 GACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTG 28002 || | ||| | ||| || ||||| |||||||| || || |||||||||||| | Sbjct 30827 GATGGACGTACATTGAGTGACTACAATATCCAAAAGGAATCAACATTGCATTTGGTTCTT 30886 Query 28003 CGTTTGCGTGGCGG 28016 ||| | ||||| || Sbjct 30887 CGTCTTCGTGGTGG 30900 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 355733688684579