Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_031007.1 Length=223935 Score E Sequences producing significant alignments: (Bits) Value seq15550 93.3 6e-14 >seq15550 Length=6095 Score = 93.3 bits (102), Expect = 6e-14 Identities = 98/129 (76%), Gaps = 0/129 (0%) Strand=Plus/Minus Query 99202 AGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCA 99261 ||| ||||| || || || || ||||| ||||| |||||||||| || || |||| Sbjct 2857 AGATCGTACTGGGGTGGGAACGCTCTCTATCTTCGGCTACCAGATGCGCTTTAACTTGCA 2798 Query 99262 AGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATTCACGAACT 99321 ||| |||||||| |||| || || || || || || | ||||| |||||| | ||||| Sbjct 2797 AGAGGGCTTTCCATTGGTCACCACCAAACGGTGCCATCTACGTTCAATTATTTATGAACT 2738 Query 99322 GCTGTGGTT 99330 ||||||||| Sbjct 2737 GCTGTGGTT 2729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 716198218723400