Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_031007.1
Length=223935
Score E
Sequences producing significant alignments: (Bits) Value
seq15550 93.3 6e-14
>seq15550
Length=6095
Score = 93.3 bits (102), Expect = 6e-14
Identities = 98/129 (76%), Gaps = 0/129 (0%)
Strand=Plus/Minus
Query 99202 AGACCGTACGGGAACCGGTACCCTGTCTATTTTCGGGCACCAGATGCGTTTCAATCTGCA 99261
||| ||||| || || || || ||||| ||||| |||||||||| || || ||||
Sbjct 2857 AGATCGTACTGGGGTGGGAACGCTCTCTATCTTCGGCTACCAGATGCGCTTTAACTTGCA 2798
Query 99262 AGAAGGCTTTCCGCTGGTAACGACTAAGCGCTGTCACATGCGTTCGATTATTCACGAACT 99321
||| |||||||| |||| || || || || || || | ||||| |||||| | |||||
Sbjct 2797 AGAGGGCTTTCCATTGGTCACCACCAAACGGTGCCATCTACGTTCAATTATTTATGAACT 2738
Query 99322 GCTGTGGTT 99330
|||||||||
Sbjct 2737 GCTGTGGTT 2729
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 716198218723400
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |