Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_031011.1
Length=168993
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 118 1e-21
>seq7918
Length=32631
Score = 118 bits (130), Expect = 1e-21
Identities = 273/410 (67%), Gaps = 6/410 (1%)
Strand=Plus/Plus
Query 38199 TTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTT 38258
||||| || || |||||||||| ||| || | || ||||| || ||||| || |||
Sbjct 18042 TTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTT 18101
Query 38259 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 38318
|| || || | || ||| ||||| |||||| | ||||| | ||||| ||
Sbjct 18102 TTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCT 18161
Query 38319 CCGCCACGAATTCCGCCCTGTGAACATGAGTTAACTGCAGCCTGAAAATGTTTCCAAAAA 38378
|| || || | ||||| || || || || || || || | || |||||||| |||||
Sbjct 18162 CCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAA 18221
Query 38379 GGAATAACACCAGGATGGCATACATCACCCATGCCAATCTCAGAACCTTCGGCACGAATC 38438
|||||| || | ||| | | ||||| || ||| ||| ||| || |||
Sbjct 18222 GGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATC 18281
Query 38439 ATACCAACGTTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAA---GCG 38495
| || | ||||| ||||| || || |||| ||||| |||| ||||| | | |||
Sbjct 18282 TTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCG 18341
Query 38496 GAAGCCTTATTGATAGACTTCAATGAATCACCTGCCTCAATAACAACACATGAACTAAAC 38555
| || |||||| || | || ||| | ||| || | ||||| || |||||
Sbjct 18342 GTGGC---ATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAAT 18398
Query 38556 TGTCGAGTCGGAGTACGGCAACCAGCCATAATAGGAGTTGGCAATGAAAT 38605
|| || || || ||||| ||| |||||||| ||||| |||| |||||
Sbjct 18399 TGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT 18448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 540449039272760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |