Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_031030.1
Length=170788
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 127 2e-24
>seq7918
Length=32631
Score = 127 bits (140), Expect = 2e-24
Identities = 275/410 (67%), Gaps = 6/410 (1%)
Strand=Plus/Plus
Query 139476 TTCAGTTGAACACCATAATCCATATGACGAATGCGGTTTTCTTCTACGCCTTTGTTATTT 139535
||||| || || |||||||||| ||| || | || ||||| || ||||| || |||
Sbjct 18042 TTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCGATTGTTT 18101
Query 139536 TTCAAAACGAGAAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGTAGCAGCG 139595
|| || || | || ||| ||||| |||||| | ||||| | ||||| ||
Sbjct 18102 TTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGTAGCGGCT 18161
Query 139596 CCGCCACGAATTCCACCCTGTGAACATGATTTAACTGCAGTCTGAAAATGTTTCCAAAAA 139655
|| || || | || || || || || ||||| || || || || |||||||| |||||
Sbjct 18162 CCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTTGTAAAAA 18221
Query 139656 GGAATAACACCAGTATGACGTACTTCACCCATGCCAATTTTAGAACCTTCAGCACGAATC 139715
|||||| || |||||| | ||||| || ||| ||| || || |||
Sbjct 18222 GGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGCGCGGATC 18281
Query 139716 ATACCAACATTAATACCAATTCCAGCGCGTTTAGAGATATATTCAACAATTGAA---GCG 139772
| || ||||||| ||||| || || |||| ||||| |||| ||||| | | |||
Sbjct 18282 TTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGCACTGGCG 18341
Query 139773 GAAGCCTTATTGATAGACTTCAATGAATCTCCTGCCTCAATAACGACGCATGAACTAAAC 139832
| || |||||| || | || |||| | ||| || | || || || |||||
Sbjct 18342 GTGGC---ATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCTAAAT 18398
Query 139833 TGCCGAGTTGGAGTACGACAGCCAGCCATAATAGGAGTTGGTAATGAAAT 139882
|| || ||||| |||||| || |||||||| ||||| || | |||||
Sbjct 18399 TGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAAT 18448
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546190908464160
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |