Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_031047.1
Length=170770
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 109 6e-19
>seq7918
Length=32631
Score = 109 bits (120), Expect = 6e-19
Identities = 271/410 (66%), Gaps = 6/410 (1%)
Strand=Plus/Minus
Query 151994 ATTTCATTGCCAACTCCTATTATGGCTGGTTGTCGTACTCCTACTCGACAGTTCAGTTCA 152053
||||| |||| ||||| |||||||| ||| |||||| || || || || || || ||
Sbjct 18448 ATTTCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGCTCT 18389
Query 152054 TGCGTTGTTATTGAGGCAGGAGATTCGCTGAAGTCTATCAATAAGGCTTCTGC---TTCA 152110
|| || | || ||| | |||| | | || |||||| || | || | |
Sbjct 18388 TGTGTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAAT---GCCACCGCCAGTGCC 18332
Query 152111 ATTGTTGAATATATCTCCAAACGAGCTGGAATCGGCATTAACGTTGGTATGATTCGTGCC 152170
||||| |||| |||| |||| || || || || ||||| | || | ||| || |||
Sbjct 18331 ATTGTGAAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCC 18272
Query 152171 GAAGGTTCTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAA 152230
||| ||| || ||||| | ||||| || ||||||||||| |||
Sbjct 18271 TTAGGCAGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTACAAA 18212
Query 152231 CATTTTCAGACTGCTGTTAAATCATGCTCACAGGGTGGAATTCGTGGCGGCGCTGCTACT 152290
||||| || || || || ||||| ||||| || || || | || || || || |||||
Sbjct 18211 CATTTCCAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTACC 18152
Query 152291 GCTTATTATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAA 152350
| ||||| | |||||| ||||| ||| || | || || ||||| ||
Sbjct 18151 CTCTTCTATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAATCGG 18092
Query 152351 GGCGTAGAAGAAAACCGCATCCGTCATATGGATTATAGTGTTCAGCTGAA 152400
||||| || ||||| || | || ||| |||||||| | || ||||||||
Sbjct 18091 GGCGTTGAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAA 18042
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 546133329831600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |