Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_031047.1 Length=170770 Score E Sequences producing significant alignments: (Bits) Value seq7918 109 6e-19 >seq7918 Length=32631 Score = 109 bits (120), Expect = 6e-19 Identities = 271/410 (66%), Gaps = 6/410 (1%) Strand=Plus/Minus Query 151994 ATTTCATTGCCAACTCCTATTATGGCTGGTTGTCGTACTCCTACTCGACAGTTCAGTTCA 152053 ||||| |||| ||||| |||||||| ||| |||||| || || || || || || || Sbjct 18448 ATTTCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGCTCT 18389 Query 152054 TGCGTTGTTATTGAGGCAGGAGATTCGCTGAAGTCTATCAATAAGGCTTCTGC---TTCA 152110 || || | || ||| | |||| | | || |||||| || | || | | Sbjct 18388 TGTGTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAAT---GCCACCGCCAGTGCC 18332 Query 152111 ATTGTTGAATATATCTCCAAACGAGCTGGAATCGGCATTAACGTTGGTATGATTCGTGCC 152170 ||||| |||| |||| |||| || || || || ||||| | || | ||| || ||| Sbjct 18331 ATTGTGAAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCC 18272 Query 152171 GAAGGTTCTAAGATTGGCATGGGTGAAGTACGCCATACTGGTGTTATTCCTTTTTGGAAA 152230 ||| ||| || ||||| | ||||| || ||||||||||| ||| Sbjct 18271 TTAGGCAGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTACAAA 18212 Query 152231 CATTTTCAGACTGCTGTTAAATCATGCTCACAGGGTGGAATTCGTGGCGGCGCTGCTACT 152290 ||||| || || || || ||||| ||||| || || || | || || || || ||||| Sbjct 18211 CATTTCCAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTACC 18152 Query 152291 GCTTATTATCCTATTTGGCATTTGGAAGTTGAAAATCTTCTCGTTTTGAAAAATAACAAA 152350 | ||||| | |||||| ||||| ||| || | || || ||||| || Sbjct 18151 CTCTTCTATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAATCGG 18092 Query 152351 GGCGTAGAAGAAAACCGCATCCGTCATATGGATTATAGTGTTCAGCTGAA 152400 ||||| || ||||| || | || ||| |||||||| | || |||||||| Sbjct 18091 GGCGTTGAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAA 18042 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 546133329831600