Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_031057.1
Length=180219
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 127 2e-24
>seq7918
Length=32631
Score = 127 bits (140), Expect = 2e-24
Identities = 271/405 (67%), Gaps = 0/405 (0%)
Strand=Plus/Minus
Query 43393 TCGTTACCTACGCCTATTATGGCTGGTGTGCGTACTCCTACGCGTCAGTTTTCCAGTTGC 43452
||| | ||||| || |||||||| ||||| ||||| || || ||||| ||| | |||
Sbjct 18445 TCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTCAATTTAGCTCTTGT 18386
Query 43453 GTAGTGATTGAATCAGGTGATTCACTGGGTTCTCTGAATGCTGTAACCTCTGCGATCGTG 43512
|| | || || | | ||| | | || | ||||| || ||| || |||
Sbjct 18385 GTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAATGCCACCGCCAGTGCCATTGTG 18326
Query 43513 AAGTATATTTCACAACGCGCGGGTATCGGTGTTAATGCTGGACACATTCGCGCAATGGGT 43572
|| || | || ||||| || ||||| || ||||||| || | || ||||| | ||
Sbjct 18325 AAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGATCCGCGCCTTAGGC 18266
Query 43573 TCTAAAATCCGTGGTGGTGAAGCAGTACATACAGGCGTGATCCCGTTCTGGAAACATATT 43632
|| || || ||||| || | ||||| ||| || || || | |||||| |
Sbjct 18265 AGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTTTTTACAAACATTTC 18206
Query 43633 CAGACAGCGGTTAAATCCTGTTCACAAGGTGGCGTTCGTGGTGGTGCTGCAACGTTGTAT 43692
|| ||||| || ||||| || || ||||| || || || || || || || || | |
Sbjct 18205 CAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAGCCGCTACCCTCTTC 18146
Query 43693 TATCCGATCTGGCATTTGGAAGTTGAAAACCTGCTGGTTCTGAAAAACAACAAAGGTGTT 43752
|||||| | |||||| ||||| ||| |||| | || | |||||||| || |||
Sbjct 18145 TATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAAACAATCGGGGCGTT 18086
Query 43753 GAGAATAACCGTATTCGTCACCTGGATTATGGCGTTCAGCTTAAC 43797
||| | || || | || || ||||||||||| || ||||| |||
Sbjct 18085 GAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAAC 18041
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 576358913112680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |