Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_031095.1
Length=168758
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 163 3e-35
>seq7918
Length=32631
Score = 163 bits (180), Expect = 3e-35
Identities = 292/425 (69%), Gaps = 1/425 (0%)
Strand=Plus/Minus
Query 136374 CTACTAAAAAGATTTCATTGCCAACACCAATTATGTCTGGTGTTCGTACTCCAACCCGCC 136433
|| ||| ||| ||||| |||| || || |||||| | ||||||||||| |||||||| |
Sbjct 18458 CTGCTATAAA-ATTTCGCTGCCTACTCCGATTATGGCGGGTGTTCGTACCCCAACCCGTC 18400
Query 136434 AGTTCAGTTCATGCGTAGTTATTGAAGGTGGTGATAGTCTTAATTCAATTAACGAAGCCG 136493
| || || || || || | || || ||| |||||| | | || || || | |||
Sbjct 18399 AATTTAGCTCTTGTGTGTTAATCGAGTGTGCAGATAGTTTAGACTCCATCAATGCCACCG 18340
Query 136494 CTGCATCAATTACGAAATACATTAGTAAGCGTGCTGGTATTGGTATTAATGCGGGGATGA 136553
| | ||| ||||||| | | | ||||| |||||||| |||||||| || | ||
Sbjct 18339 CCAGTGCCATTGTGAAATACGTCTCTCAACGTGCCGGTATTGGGATTAATGCCGGCAAGA 18280
Query 136554 TTCGTGCAGAAGGATCAAAAATTGGATTCGGTGAAGTCAAGCATACTGGTGTTATTCCTT 136613
| || || ||| ||| | |||||| | | ||||| || ||||||||
Sbjct 18279 TCCGCGCCTTAGGCAGCCCCATTCGCGGCGGTGAGGCCTTTCATACCGGCTGTATTCCTT 18220
Query 136614 TCTGGAAACACTTCCAAACCGCAGTTAAGTCATGCTCCCAAGGCGGAGTCCGTGGTGGTG 136673
| | ||||| |||||||| || || || || |||||||||||||| || || || || |
Sbjct 18219 TTTACAAACATTTCCAAACAGCCGTCAAATCGTGCTCCCAAGGCGGTGTGCGCGGGGGAG 18160
Query 136674 CAGCTACACTGTATTATCCGATGTGGCACTTGGAAGTTGAAAACCTCCTCGTACTTAAGA 136733
| ||||| || | |||||| | ||||| ||||| ||| ||| | || | || |
Sbjct 18159 CCGCTACCCTCTTCTATCCGCTATGGCATCGCGAAGTAGAAGCCCTGTTAGTGTTAAAAA 18100
Query 136734 ACAACAAAGGTGTAGATGAAAACCGTATTCGCCATTTAGATTATGGTGTTCAGATTAATA 136793
|||| || || || ||||| || | |||||| | |||||||| || ||| | || |
Sbjct 18099 ACAATCGGGGCGTTGAGGAAAATCGGGTACGCCATCTGGATTATGGGGTACAGCTGAACA 18040
Query 136794 ACCTG 136798
| |||
Sbjct 18039 AACTG 18035
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 539697318236560
| Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |