Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28] 29,677 sequences; 154,533,842 total letters Query= NC_031126.1 Length=244840 Score E Sequences producing significant alignments: (Bits) Value seq15550 84.2 3e-11 >seq15550 Length=6095 Score = 84.2 bits (92), Expect = 3e-11 Identities = 81/104 (78%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 200122 TCTATTTTCGGTGCACAGATGCGCTTCAATCTACAAGACGGCTTCCCATTGGTGACGACC 200181 ||||| ||||| ||||||||||| || | ||||| ||||| |||||||| || ||| Sbjct 2832 TCTATCTTCGGCTACCAGATGCGCTTTAACTTGCAAGAGGGCTTTCCATTGGTCACCACC 2773 Query 200182 AAGAAGTGCCATCTCCGTTCCATCATTCACGAGCTGTTGTGGTT 200225 || ||||||||| ||||| || ||| | || ||| ||||||| Sbjct 2772 AAACGGTGCCATCTACGTTCAATTATTTATGAACTGCTGTGGTT 2729 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 783069402816000