Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_031928.1
Length=169936
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 123 3e-23
>seq7918
Length=32631
Score = 123 bits (136), Expect = 3e-23
Identities = 275/413 (67%), Gaps = 0/413 (0%)
Strand=Plus/Plus
Query 143370 CAGGTCGTTCAACTGGATTCCATAGTCCATATGACGAATACGGTTCTCATCGACACCCTT 143429
||| | ||||| ||| | ||||| |||| ||| || | || || || || || |||
Sbjct 18035 CAGTTTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCG 18094
Query 143430 GTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGT 143489
|||||||| | || | ||| ||| ||||| |||||| | ||||| | ||
Sbjct 18095 ATTGTTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGT 18154
Query 143490 AGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTT 143549
||| || || || || | || ||||| || || ||||| || || || |||||||||||
Sbjct 18155 AGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTT 18214
Query 143550 CCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGC 143609
| || |||||| |||||||| | | || || || ||| | ||| ||
Sbjct 18215 GTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGC 18274
Query 143610 ACGAATCATACCAACGTTGATACCAATACCGGCACGTTTAGAAATGTATTCAATTATTGA 143669
|| ||| | || | || || |||||||||||||||| ||| | ||||| | || |
Sbjct 18275 GCGGATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGC 18334
Query 143670 GTTAGCAGTTTTGTTAATAGATTTCAGTGAGTCGCCTGCTTCAATAACCACACAAGAACT 143729
| || || || || || | | || | || || | ||||||||| ||
Sbjct 18335 ACTGGCGGTGGCATTGATGGAGTCTAAACTATCTGCACACTCGATTAACACACAAGAGCT 18394
Query 143730 AAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTTGGTAATGAAA 143782
||||||||||||||| ||||| | || |||||||| ||||| || | ||||
Sbjct 18395 AAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAA 18447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 543465519856320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |