Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20riparius_20[genbank_20GCA_5F001014505.1_202015-05-28]
29,677 sequences; 154,533,842 total letters
Query= NC_031934.1
Length=168929
Score E
Sequences producing significant alignments: (Bits) Value
seq7918 127 2e-24
>seq7918
Length=32631
Score = 127 bits (140), Expect = 2e-24
Identities = 278/414 (67%), Gaps = 2/414 (0%)
Strand=Plus/Plus
Query 142451 CAGGTCGTTCAACTGGATTCCGTAGTCCATATGACGAATACGGTTCTCATCGACACCCTT 142510
||| | ||||| ||| | || || |||| ||| || | || || || || || |||
Sbjct 18035 CAGTTTGTTCAGCTGTACCCCATAATCCAGATGGCGTACCCGATTTTCCTCAACGCCCCG 18094
Query 142511 GTTGTTTTTCAGAACGAGCAGATTTTCAACTTCCAAATGCCAAATAGGATAATAAGCAGT 142570
|||||||| | || | ||| ||| ||||| |||||| | ||||| | ||
Sbjct 18095 ATTGTTTTTTAACACTAACAGGGCTTCTACTTCGCGATGCCATAGCGGATAGAAGAGGGT 18154
Query 142571 AGCAGCGCCGCCACGGATTCCACCTTGTGAACATGATTTAACAGCAGTCTGGAAATGTTT 142630
||| || || || || | || ||||| || || ||||| || || || |||||||||||
Sbjct 18155 AGCGGCTCCCCCGCGCACACCGCCTTGGGAGCACGATTTGACGGCTGTTTGGAAATGTTT 18214
Query 142631 CCAGAATGGAATAACACCGGTATGCTTGACTTCGCCCATGCCAATACGAGAACCTTCAGC 142690
| || |||||| |||||||| | | || || || ||| | ||| ||
Sbjct 18215 GTAAAAAGGAATACAGCCGGTATGAAAGGCCTCACCGCCGCGAATGGGGCTGCCTAAGGC 18274
Query 142691 ACGAATCATACCAACGTTGATACCAATACCTGCACGTTTAGAAATGTATTCAATTATTGA 142750
|| ||| | || | || || |||||||| ||||||| ||| | ||||| | || |
Sbjct 18275 GCGGATCTTGCCGGCATTAATCCCAATACCGGCACGTTGAGAGACGTATTTCACAATGGC 18334
Query 142751 GTTAGCAGTTTTGTTAATAGA-TTTCAGCGAGTCGCCGGCTTCAATAACCACACAAGAAC 142809
| || || || || || | | | | | || | || || | ||||||||| |
Sbjct 18335 ACTGGCGGTGGCATTGATGGAGTCTAAACTA-TCTGCACACTCGATTAACACACAAGAGC 18393
Query 142810 TAAATTGACGGGTTGGTGTACGTGCTCCAGCCATAATAGGAGTAGGCAATGAAA 142863
|||||||||||||||| ||||| | || |||||||| |||||||||| ||||
Sbjct 18394 TAAATTGACGGGTTGGGGTACGAACACCCGCCATAATCGGAGTAGGCAGCGAAA 18447
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 540244315245880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |