Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq119 190 2e-43
seq726 87.8 2e-12
>seq119
Length=197918
Score = 190 bits (210), Expect = 2e-43
Identities = 531/809 (66%), Gaps = 12/809 (1%)
Strand=Plus/Plus
Query 16696 TTCGAAAAAGTTAGTTTTGCCCTCTAGAGATATATTCTCCATGAAATCAAAA-GGATTAG 16754
|||||| ||||| || |||||||| || || ||| ||||| |||| | || |||||
Sbjct 167181 TTCGAAGAAGTTTGTCTTGCCCTCAAGTGAAATAAATTCCAT-AAATGAGAATGGATTTT 167239
Query 16755 TAGCTGAAAATATTTTAG--AGTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTC 16812
| | | | | |||| ||| |||| ||| | | ||| ||| || ||||||||
Sbjct 167240 TGGTATTATAGACTTTATCAAGT--CCCAATTCACCCAATAAATGATCAGCAACAAATTC 167297
Query 16813 TATATATTGGCACATTAATTCGCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGT 16872
||| || || |||||| || || ||||| || | | || ||||| || || ||
Sbjct 167298 TATGTACTGAGTCATTAAATCACAATTCATGCCCAACATCTTAACTGGAAGTGCGTCAGT 167357
Query 16873 CAAAAATCGTTGCTCTATAACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGA 16932
|||||| | ||| || || || || | ||||| | | |||| ||||| |
Sbjct 167358 TAAAAATTCCTTCTCAATTTTTACAGCCTCTGTGATAATTTCAACTACTCTTTCCTTTGG 167417
Query 16933 CGGTGTATGTTTAAGATGTTTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTC 16992
|| | |||| ||||||||| |||| | ||||| || || | ||| | ||| |||||
Sbjct 167418 TGGCTTCTGTTCAAGATGTTTGTACATTAAGCATGCAAAGTCACGATGAAGTCCTTCGTC 167477
Query 16993 TCTGCTGATAAGTTCGTTAGAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCA 17052
||| |||||||| || |||||||||||||| ||||| ||||| ||||| | |||
Sbjct 167478 TCTCGAAATAAGTTCATTTGAAAATGTCAACCCTGGCATTAATCCTCTCTTCTTAATCCA 167537
Query 17053 AAATATCGCGGCGAACGACCCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAA 17112
|||||| || || || ||| |||||| || || ||||| | |||||| || || |
Sbjct 167538 AAATATAGCTGCAAAGCTACCACTAAAGAAAATCCCTTCGACAGCTGCAAAAGCAATAAC 167597
Query 17113 TCGTTCGGCGTACGTCGCGTCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTG 17172
|||||| | | | || | ||| | ||||| || |||| || || || |
Sbjct 167598 TCGTTCACCAAAGTTTGCATTCTTGCTGGATATCCAATTTAAAGCCCAGTCAGCCTTCTT 167657
Query 17173 CTTTATGCAATCCATCGTTTCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGAT 17232
||| | || | || || || || || ||||| || | || | || |
Sbjct 167658 CTTAACACATGGAAGTGTCTCAATTGCATTGAATAAGAAGTCACGCTGCTTTGCATCTCT 167717
Query 17233 TATATACGTATCGATGAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTG 17292
||||| || || || | || |||||| || ||||||| || ||||| || || ||
Sbjct 167718 AATATAAGTTTCAATTAATATTGAGTACATCTCCGAGTGTACATTTTCCATAGCAATTTG 167777
Query 17293 AAATCCGTAAAAGCATCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAG 17352
||||| || ||| |||| ||||| | | |||||||||| ||| || || ||
Sbjct 167778 GAATCCATAGAAGAATCGAGCTTCTGGAACTTGAACTTCCTGACTGAAACGCTCAATTAA 167837
Query 17353 ATTTTCGTTCACGATGCCGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAAT- 17411
||| || || |||||||| || || || || || || |||| |||| || ||||
Sbjct 167838 ATTCTCATTTACGATGCCATCAGATGCAGCAAAGAAAGCTAATACATGCGAGATAAAATG 167897
Query 17412 --ATTTTTCGTCCGGTGTAAGAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTC 17469
| | ||| | ||| | |||||| | | |||||| |||| ||| |||||
Sbjct 167898 ACGCTCTGAATCC---TTGAGATTGTTCCAGTCTTCCATATCTTTTGATAAATCGACTTC 167954
Query 17470 TTCGGGGGTCCAAAAACTAGCCACTGCCT 17498
||| ||||| || || || | ||||
Sbjct 167955 CTCGACTGTCCAGAAGCTGGCTTCAGCCT 167983
>seq726
Length=60972
Score = 87.8 bits (96), Expect = 2e-12
Identities = 142/202 (70%), Gaps = 2/202 (1%)
Strand=Plus/Plus
Query 119851 CCATAGGCATCCCACGTATCCGTTGGGATCCGTTCCATCTAACTCGTATTTATCGTTTAA 119910
||| | ||| ||||| || ||||| ||||| | ||||| | | | ||| |||||
Sbjct 19303 CCACATGCAGCCCACATAGCCGTTCGGATCTCTACCATCAAGATTAAAGCGATCATTTAA 19362
Query 119911 GTAGATA-CAGACGCTTAACGCACTTTCAGGAGTCTCGCTCCATTCCAGTAtttttttAG 119969
||||| ||| | || || ||| || || | ||||||| | || |||||||
Sbjct 19363 ATAGATTGCAGTTTCAAGAC-CATCTTCTGGCGTTGCTGTCCATTCTAAAATCTTTTTAG 19421
Query 119970 CCCAGTACATACGTAAGTATCCATGCATTTTACCTTCACGAACCATTTGAAGTTGTGCGG 120029
|||| ||||| || || ||||||||||||||||||| |||||||| |||||||
Sbjct 19422 CCCAATACATTCGCAAAAATCCATGCATTTTACCTTCTTTTGTCATTTGAATTTGTGCGC 19481
Query 120030 CGTTCCATAAGGGATCGTGTGT 120051
|||||||| |||||| ||
Sbjct 19482 TATTCCATAAATCATCGTGAGT 19503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517377235947000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |