Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_001266.1
Length=159857
Score E
Sequences producing significant alignments: (Bits) Value
seq119 192 6e-44
seq726 87.8 2e-12
>seq119
Length=197918
Score = 192 bits (212), Expect = 6e-44
Identities = 551/837 (66%), Gaps = 24/837 (3%)
Strand=Plus/Plus
Query 15912 TTTGGTAATCACTAACGCGTTTTTCGAAGAAGTTAGTTTTTCCCTCTAAAGATATATTTT 15971
|||| || |||| ||| | |||||||||||| || || ||||| | || ||| ||
Sbjct 167159 TTTGATATTCACCAACCTTTCGTTCGAAGAAGTTTGTCTTGCCCTCAAGTGAAATAAATT 167218
Query 15972 CCATAAAATCAAAGGGATTAGTAGCTGAAAATATCTTAG--AGTACCCCAGTTCCGTAAC 16029
||||||| || ||||| | | | | | ||| ||| |||| ||| |
Sbjct 167219 CCATAAATGAGAATGGATTTTTGGTATTATAGACTTTATCAAGT--CCCAATTCACCCAA 167276
Query 16030 TAATCTATCTGCTACAAATTCTATATATTGACACATTAAGTCGCAATTAATTCCTATAAG 16089
||| ||| || ||||||||||| || ||| |||||| || ||||| || || | |
Sbjct 167277 TAAATGATCAGCAACAAATTCTATGTACTGAGTCATTAAATCACAATTCATGCCCAACA- 167335
Query 16090 TCGTACC-GGAAGAGCTTTTGTTAAAAATTGTTGTTCTATCACAACCGCTTCTTTAATGA 16148
|| || | ||||| || | |||||||||| | || || || || ||| | || |
Sbjct 167336 TCTTAACTGGAAGTGCGTCAGTTAAAAATTCCTTCTCAATTTTTACAGCCTCTGTGATAA 167395
Query 16149 TATCGGTGGCTCGTGTTTCAGACGGTG---TATGGTTTAGGTGTTTAAACATTAGACACG 16205
| || ||| |||| |||| | || | || ||||| |||||| || |
Sbjct 167396 TTTCAACTACTC---TTTCCTTTGGTGGCTTCTGTTCAAGATGTTTGTACATTAAGCATG 167452
Query 16206 CGAAGTCGCAATGTAGTCCTTCGTCTCTGCTGATAAGTTCGTTGGAAAAAGTTAACCCTG 16265
| ||||| | ||| |||||||||||||| |||||||| || ||||| || |||||||
Sbjct 167453 CAAAGTCACGATGAAGTCCTTCGTCTCTCGAAATAAGTTCATTTGAAAATGTCAACCCTG 167512
Query 16266 GCATTTTTCCTCGTTTCTTTAACCAGAATATCGCAGCAAATGACCCCGAAAAGAATATAC 16325
||||| ||||| ||||| | ||| ||||| || ||||| || |||||| || |
Sbjct 167513 GCATTAATCCTCTCTTCTTAATCCAAAATATAGCTGCAAAGCTACCACTAAAGAAAATCC 167572
Query 16326 CCTCAACAGATGCAAAAGCGATTAATCGTTCCGCGTACGTAGCATCTTTATTACGAATCC 16385
| || |||| ||||||||| || | |||||| | | | |||| || | ||||
Sbjct 167573 CTTCGACAGCTGCAAAAGCAATAACTCGTTCACCAAAGTTTGCATTCTTGCTGGATATCC 167632
Query 16386 ATTTCTGTACCCATTCGGCTTTTTGTTTTATACAATCCATCGTTTCTATGGCCTTAAACA 16445
| || |||| || || || | || | ||| | || || || || || || |
Sbjct 167633 AATTTAAAGCCCAGTCAGCCTTCTTCTTAACACATGGAAGTGTCTCAATTGCATTGAATA 167692
Query 16446 A----TTTCTCTTTTTCCTGAATATCGATTATATACGTATCAATCAGTAAACTGTACATT 16501
| | | || || || || || | ||||| || ||||| | || ||||||
Sbjct 167693 AGAAGTCACGCTGCTT--TGCATCTC--TAATATAAGTTTCAATTAATATTGAGTACATC 167748
Query 16502 TCTGAGTGTATGTTCTCTATGGCTATCTGAAATCCATAGAAGCATCGAGCCTCCGCTATT 16561
|| ||||||| || || || || || || |||||||||||| ||||||| || | | |
Sbjct 167749 TCCGAGTGTACATTTTCCATAGCAATTTGGAATCCATAGAAGAATCGAGCTTCTGGAACT 167808
Query 16562 TGTACTTCC--ACGTAAAATCGTTCCGCCAGGTTCTCATTCACGATACCGTCACTTGCAG 16619
|| |||||| || ||| || || | |||||||| ||||| || ||| |||||
Sbjct 167809 TGAACTTCCTGACTGAAA--CGCTCAATTAAATTCTCATTTACGATGCCATCAGATGCAG 167866
Query 16620 CAAAAAACGCCAATATGTGCTTAATGAAATATTTTTCGTCAGATGTAAGAATATGCCAAT 16679
|||| || || |||| ||| || |||| || | | ||| | | ||| |
Sbjct 167867 CAAAGAAAGCTAATACATGCGAGATAAAATGACGCTCTGAATCCTTGAGATTGTTCCAGT 167926
Query 16680 CTTTTAAATCTTTGGATATATCCACTTCTTCTGGCGTCCAAAAGCTAGCCACTGCCT 16736
||| | |||||| |||| ||| ||||| || ||||| ||||| || | ||||
Sbjct 167927 CTTCCATATCTTTTGATAAATCGACTTCCTCGACTGTCCAGAAGCTGGCTTCAGCCT 167983
>seq726
Length=60972
Score = 87.8 bits (96), Expect = 2e-12
Identities = 81/103 (79%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 119102 TCCATTCCAGTAtttttttAGCCCAGTACATACGTAAATACCCGTGCATTTTACCCTCGT 119161
||||||| | || ||||||||||| ||||| || ||| | || ||||||||||| || |
Sbjct 19401 TCCATTCTAAAATCTTTTTAGCCCAATACATTCGCAAAAATCCATGCATTTTACCTTCTT 19460
Query 119162 TAATCATCTGAAGTTGTGCGGTGTTCCATAGAGGATCGTGTGT 119204
| |||| |||| ||||||| | ||||||| | |||||| ||
Sbjct 19461 TTGTCATTTGAATTTGTGCGCTATTCCATAAATCATCGTGAGT 19503
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 511248030503000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |