Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq767 163 2e-35
>seq767
Length=55330
Score = 163 bits (180), Expect = 2e-35
Identities = 384/573 (67%), Gaps = 10/573 (2%)
Strand=Plus/Minus
Query 101702 TAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGA 101761
|| || |||||||| || | |||||| | ||| || |||||| | ||| || ||||||
Sbjct 37963 TAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTTGTAACATGA 37904
Query 101762 GCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821
||||||||| | || || | | ||| ||||| || || || ||||| | ||||||
Sbjct 37903 GCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCCAAGACCCATA 37844
Query 101822 TCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTT 101881
|||||||||||||| || | ||| ||| | | |||| | |||||||||||||
Sbjct 37843 TCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAGCGACATAAAATTGAACG 37784
Query 101882 AATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACAT 101940
| ||| ||||| || || | |||||| |||||||| |||||| || | ||
Sbjct 37783 AG-ACAGTGACATGGTGGAAGTGCCATTTGTGGAATGTCCACTGGATTCCATGCGCTCAA 37725
Query 101941 TAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTC 102000
|| || | | ||| | || || | ||| || ||||| | | |||||||||||
Sbjct 37724 TATAATACGACGATCATTTGGATTGGCTTTGATGCGTTCAATGACATCCTTTAATTGGTC 37665
Query 102001 AACTCCTTCTCCTTTATAATCGCGCCCAACAC---CTTTATATTCTGCTCCGAAATGCCT 102057
|| ||||| |||| ||| || || | | |||||||| || || ||||| |
Sbjct 37664 AATTCCTTGGCCTTCATATTC---ATCATCGCATGTTTTATATTTGGCACCAAAATGTCG 37608
Query 102058 CCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTT 102117
||||||||||||||| || || || | ||| || | | | |||| |||||| |
Sbjct 37607 CCACTGAAATCCATAAACTGGACCCAAATCACCAACTTGACGATCATGAAAACCGGATGC 37548
Query 102118 ATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCA-CGCCAGCTGCTGATAGCT 102176
||| | ||| | | | || | |||||||| | | | | ||| ||||
Sbjct 37547 ATCAAGGAATTCACGCGTACTGTTTCCGTCCCAAATTTTTATATTCTTCGCCTG-TAGCA 37489
Query 102177 CTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAA 102236
||| || || |||||| | | ||||| | || |||||| |||| |||| |||||
Sbjct 37488 ATTTAGCATCTGTGGATCCTTTTACGAACCATAGAAGCTCTTCAGCAACTCCTCGCCAAA 37429
Query 102237 ATACTCTCTTAGTAGTTAAAAGTGGAAATTCAT 102269
|||||| || || || | | |||||||| ||
Sbjct 37428 ATACTCGTTTGGTTGTAAGCAATGGAAATTGAT 37396
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361136618457275
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |