Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07] 26,025 sequences; 213,462,749 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq767 163 2e-35 >seq767 Length=55330 Score = 163 bits (180), Expect = 2e-35 Identities = 384/573 (67%), Gaps = 10/573 (2%) Strand=Plus/Minus Query 101702 TAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGA 101761 || || |||||||| || | |||||| | ||| || |||||| | ||| || |||||| Sbjct 37963 TAAATATGAGCATCGCCAAAAGTATGAACAAAATCACCAGGCTTCAAATTTGTAACATGA 37904 Query 101762 GCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATA 101821 ||||||||| | || || | | ||| ||||| || || || ||||| | |||||| Sbjct 37903 GCAATCATGTACGTCAATAAGGCATACGATGCAATATTGAAAGGAACTCCAAGACCCATA 37844 Query 101822 TCAGCTGATCTTTGATACAGTTGACAGGAAAGCTTTCCATCACAGACATAAAATTGACTT 101881 |||||||||||||| || | ||| ||| | | |||| | ||||||||||||| Sbjct 37843 TCAGCTGATCTTTGGTATAATTGGCAGCTCAATTCACCATTAGCGACATAAAATTGAACG 37784 Query 101882 AATACA-TGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAACATTCCAAGCACACAT 101940 | ||| ||||| || || | |||||| |||||||| |||||| || | || Sbjct 37783 AG-ACAGTGACATGGTGGAAGTGCCATTTGTGGAATGTCCACTGGATTCCATGCGCTCAA 37725 Query 101941 TAACATCCTTCTATCTGTAGGGTTTGTTTTTATAGTATCAATCAACTGTTTTAATTGGTC 102000 || || | | ||| | || || | ||| || ||||| | | ||||||||||| Sbjct 37724 TATAATACGACGATCATTTGGATTGGCTTTGATGCGTTCAATGACATCCTTTAATTGGTC 37665 Query 102001 AACTCCTTCTCCTTTATAATCGCGCCCAACAC---CTTTATATTCTGCTCCGAAATGCCT 102057 || ||||| |||| ||| || || | | |||||||| || || ||||| | Sbjct 37664 AATTCCTTGGCCTTCATATTC---ATCATCGCATGTTTTATATTTGGCACCAAAATGTCG 37608 Query 102058 CCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTCATAAAAACCAAGTTT 102117 ||||||||||||||| || || || | ||| || | | | |||| |||||| | Sbjct 37607 CCACTGAAATCCATAAACTGGACCCAAATCACCAACTTGACGATCATGAAAACCGGATGC 37548 Query 102118 ATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCA-CGCCAGCTGCTGATAGCT 102176 ||| | ||| | | | || | |||||||| | | | | ||| |||| Sbjct 37547 ATCAAGGAATTCACGCGTACTGTTTCCGTCCCAAATTTTTATATTCTTCGCCTG-TAGCA 37489 Query 102177 CTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTCAACAACACCTCTCCAAA 102236 ||| || || |||||| | | ||||| | || |||||| |||| |||| ||||| Sbjct 37488 ATTTAGCATCTGTGGATCCTTTTACGAACCATAGAAGCTCTTCAGCAACTCCTCGCCAAA 37429 Query 102237 ATACTCTCTTAGTAGTTAAAAGTGGAAATTCAT 102269 |||||| || || || | | |||||||| || Sbjct 37428 ATACTCGTTTGGTTGTAAGCAATGGAAATTGAT 37396 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361136618457275