Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Chironomus_20tentans_20[genbank_20GCA_5F000786525.1_202014-11-07]
26,025 sequences; 213,462,749 total letters
Query= NC_001973.1
Length=161046
Score E
Sequences producing significant alignments: (Bits) Value
seq442 91.5 2e-13
seq296 84.2 2e-11
>seq442
Length=86436
Score = 91.5 bits (100), Expect = 2e-13
Identities = 154/218 (71%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCACC 40749
||||| || ||||| ||||| | ||||| || || || ||| |||| ||||| |||| |
Sbjct 25216 ATGCAGATCTTCGTCAAAACCTTGACGGGTAAGACAATTACCCTCGAAGTCGA-GCCATC 25158
Query 40750 -GACA-GCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACC 40807
|||| | || ||| | |||||| || |||| || || || || || || | || |
Sbjct 25157 TGACACGATTGAAAATG-TCAAGGCTAAGATTCAAGATAAGGAAGGAATTCCACCAGATC 25099
Query 40808 AGCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACA 40867
| || || | |||| || || ||||| | || || | || || | | ||||||||
Sbjct 25098 AACAGCGTTTGATCTTTGCTGGAAAACAATTAGAAGATGGTCGTACATTGAGCGACTACA 25039
Query 40868 ACATCCAGAAGGAGGCCACGCTGCATCTAGTGTTGCGC 40905
||||||| || ||| | || || || |||||||||||
Sbjct 25038 ACATCCAAAAAGAGTCAACACTTCACTTAGTGTTGCGC 25001
>seq296
Length=113092
Score = 84.2 bits (92), Expect = 2e-11
Identities = 143/205 (70%), Gaps = 2/205 (1%)
Strand=Plus/Minus
Query 40690 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAAGCCA-C 40748
|||||||| ||||| || || | || || ||||||||||| | || || | ||||| |
Sbjct 113083 ATGCAAATTTTCGTCAAGACTTTGACAGGAAAAACCATCACATTAGAAGTTG-AGCCATC 113025
Query 40749 CGACAGCGTGCAAACGCTCAAGGAAAAAATTCTCGACAAAGAGGGCATCCCCGCGGACCA 40808
|||| | ||| | |||| ||| || | |||||||| || || || | |||||
Sbjct 113024 AGACACAATTGAAAATGTAAAGGCAAAGATCCAAGACAAAGAAGGAATTCCACCAGACCA 112965
Query 40809 GCAACGACTCATCTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 40868
|| || | |||| ||| || ||||| |||| || | || || | | |||||||||
Sbjct 112964 ACAGCGTTTGATCTTCGCAGGAAAACAATTGGAAGATGGTCGTACATTGAGCGACTACAA 112905
Query 40869 CATCCAGAAGGAGGCCACGCTGCAT 40893
|||||||| || | || |||||
Sbjct 112904 TATCCAGAAAGAATCTACATTGCAT 112880
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 515051592754000
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |